RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 C11orf42Q8N5U0 333 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 CCDC107Q8WV48 283 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 SNAPC3Q92966 411 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 LPAR3Q9UBY5 353 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 TRAPPC2LQ9UL33 140 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.422e-6■■■■□ 20.7
CCNE1-203ENST00000444983 C15orf65H3BRN8 121 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 RBBP9O75884 186 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 HEXAP06865 529 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 GZMHP20718 246 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 DLX6P56179 175 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 ZNF273Q14593 569 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 HMGN3Q15651 99 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 C17orf58Q2M2W7 97 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 MOB1BQ7L9L4 216 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 MRGPRDQ8TDS7 321 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 H1FXQ92522 213 aaKnown RBP12.45□□□□□ -0.42
CCNE1-203ENST00000444983 OPN4Q9UHM6 478 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 UBE2J1Q9Y385 318 aaPredicted RBP12.45□□□□□ -0.42
CCNE1-203ENST00000444983 LOC105371242A0A075B767 164 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 NPIPB11E5RHQ5 1161 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 J3QRK9 145 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 FOXH1O75593 365 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 RNASE12Q5GAN4 147 aaKnown RBP12.45□□□□□ -0.42
CCNE1-203ENST00000444983 C5orf24Q7Z6I8 188 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 BEST4Q8NFU0 473 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 MAFIPQ8WZ33 124 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 CCDC32Q9BV29 185 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 ST6GALNAC5Q9BVH7 336 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 CHMP1AQ9HD42 196 aaPredicted RBP12.45□□□□□ -0.42
CCNE1-203ENST00000444983 TAS2R3Q9NYW6 316 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 ZNF107Q9UII5 783 aaPredicted RBP12.45□□□□□ -0.42
CCNE1-203ENST00000444983 ANXA10Q9UJ72 324 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 MGAT4AQ9UM21 535 aa12.45□□□□□ -0.42
CCNE1-203ENST00000444983 TRGV10A0A0A0MS01 117 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 PPIAL4CA0A0B4J2A2 164 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 KIR2DS1A0A191URI9 304 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 MEX3AA1L020 520 aaKnown RBP12.44□□□□□ -0.42
CCNE1-203ENST00000444983 TRDCB7Z8K6 153 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 GDNFP39905 211 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 ACTBP60709 375 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 ACTG1P63261 375 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 LCN2P80188 198 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 TRAT1Q6PIZ9 186 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 TAF9BQ9HBM6 251 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 MMP26Q9NRE1 261 aa12.44□□□□□ -0.42
CCNE1-203ENST00000444983 IGKV1-6A0A0C4DH72 117 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 KBTBD11-OT1A0A1B0GTJ5 212 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 ZNF729A6NN14 1252 aaPredicted RBP12.43□□□□□ -0.42
CCNE1-203ENST00000444983 SCTP09683 121 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 GSTT2P0CG29 244 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 GSTT2BP0CG30 244 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 PPIAL4GP0DN37 164 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 IL7P13232 177 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 RCVRNP35243 200 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 SSTR5P35346 364 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 KIR2DS4P43632 304 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 KIR2DS1Q14954 304 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 HERPUD1Q15011 391 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 C6orf183Q5T699 404 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 CIARTQ8N365 385 aaPredicted RBP12.43□□□□□ -0.42
CCNE1-203ENST00000444983 MAPK1IP1LQ8NDC0 245 aa12.43□□□□□ -0.42
CCNE1-203ENST00000444983 IGHV2-70DA0A0C4DH43 119 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 ANKRD20A5PA0PJZ0 165 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 C17orf98A8MV24 154 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 B4DSR2 109 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 DIRAS3O95661 229 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 LIPFP07098 398 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 ZNF728P0DKX0 622 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 CCL3L1P16619 93 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 GLP1RP43220 463 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 HLA-DRB3P79483 266 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 IFITM3Q01628 133 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 TMEM249Q2WGJ8 235 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 FAM185AQ8N0U4 392 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 OR5AP2Q8NGF4 316 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 SETD6Q8TBK2 473 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 ZNF714Q96N38 554 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 ZNF286AQ9HBT8 521 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 IFT46Q9NQC8 304 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 TAS2R8Q9NYW2 309 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 CALYQ9NYX4 217 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 WNK2Q9Y3S1 2297 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 SVEP1Q4LDE5 3571 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 CELSR1Q9NYQ6 3014 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 F2RL2O00254 374 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 FABP7O15540 132 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 ENSAO43768 121 aaKnown RBP12.42□□□□□ -0.42
CCNE1-203ENST00000444983 HBZP02008 142 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 CD74P04233 296 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 FCER2P06734 321 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 MSMBP08118 114 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 KLF9Q13886 244 aaPredicted RBP12.42□□□□□ -0.42
CCNE1-203ENST00000444983 HEPN1Q6WQI6 88 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 C1orf122Q6ZSJ8 110 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 TMEM229BQ8NBD8 167 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 OR4A4PQ8NGN8 299 aa12.42□□□□□ -0.42
CCNE1-203ENST00000444983 OR1L1Q8NH94 360 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms