RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ZNF554Q86TJ5 538 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 OR13A1Q8NGR1 328 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 OR10R2Q8NGX6 335 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 OR4K15Q8NH41 348 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 SETD6Q8TBK2 473 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 ZNF596Q8TC21 504 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 LGALS14Q8TCE9 139 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 ARL11Q969Q4 196 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 SLC25A46Q96AG3 418 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 CREB3L1Q96BA8 519 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
SSBP3-208ENST00000444533 SLC6A7Q99884 636 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 CLEC7AQ9BXN2 247 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 TMEM133Q9H2Q1 129 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 DIABLOQ9NR28 239 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 POM121CA8CG34 1229 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 SERPINE3A8MV23 424 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 ARHGDIBP52566 201 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 TMBIM6P55061 237 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 RUSC1-AS1Q66K80 236 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 MZT2AQ6P582 158 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 TCF23Q7RTU1 214 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 ABHD12Q8N2K0 398 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 PRR18Q8N4B5 295 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 ACOT12Q8WYK0 555 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 TNFRSF14Q92956 283 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 ARHGAP5-AS1Q96IT6 56 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 CMSS1Q9BQ75 279 aaKnown RBP11.53□□□□□ -0.56
SSBP3-208ENST00000444533 SULT4A1Q9BR01 284 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 PECRQ9BY49 303 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 DCSTAMPQ9H295 470 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 C12orf4Q9NQ89 552 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 RHBDL2Q9NX52 303 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 SPATA2Q9UM82 520 aa11.53□□□□□ -0.56
SSBP3-208ENST00000444533 A0A075B6Q4 140 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 A0A0A6YYD4 124 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 OMGP23515 440 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 SAA4P35542 130 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 TGFBR1P36897 503 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 CEACAM3P40198 252 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 BAMBIQ13145 260 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 ARFRP1Q13795 201 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 CTF1Q16619 201 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 LTC4SQ16873 150 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 SLC16A12Q6ZSM3 486 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 C11orf42Q8N5U0 333 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 RFESDQ8TAC1 157 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 NDNFQ8TB73 568 aa11.52□□□□□ -0.57
SSBP3-208ENST00000444533 S100A16Q96FQ6 103 aaKnown RBP11.52□□□□□ -0.57
SSBP3-208ENST00000444533 TBL2Q9Y4P3 447 aaKnown RBP11.52□□□□□ -0.57
SSBP3-208ENST00000444533 AMMECR1Q9Y4X0 333 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-208ENST00000444533 A0A0A6YYH2 397 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 IGHV2-26A0A0B4J1V2 119 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 TRAV39A0A0B4J263 110 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 A6NJ64 397 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 SDCBPO00560 298 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-208ENST00000444533 HIST1H1DP16402 221 aaKnown RBP11.51□□□□□ -0.57
SSBP3-208ENST00000444533 SSTR5P35346 364 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 EFNB2P52799 333 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 DLX1P56177 255 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 PITPNAQ00169 270 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 PRB3Q04118 309 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-208ENST00000444533 C17orf58Q2M2W7 97 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 UBE2NLQ5JXB2 153 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 BCL6BQ8N143 479 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-208ENST00000444533 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 OR11H6Q8NGC7 330 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 DYRK2Q92630 601 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 GALMQ96C23 342 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 NAA50Q9GZZ1 169 aaKnown RBP11.51□□□□□ -0.57
SSBP3-208ENST00000444533 DPAGT1Q9H3H5 408 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 ZMAT3Q9HA38 289 aaKnown RBP11.51□□□□□ -0.57
SSBP3-208ENST00000444533 GNG12Q9UBI6 72 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 AK3Q9UIJ7 227 aa11.51□□□□□ -0.57
SSBP3-208ENST00000444533 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
SSBP3-208ENST00000444533 SMIM31A0A1B0GVY4 71 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 NPIPB11E5RHQ5 1161 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 TRIM77I1YAP6 450 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 RGS11O94810 467 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 GNB3P16520 340 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 HTR1DP28221 377 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 MNDAP41218 407 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 HILS1P60008 231 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 DEFB112Q30KQ8 113 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 MINOS1Q5TGZ0 78 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 ZNF626Q68DY1 528 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 GAPTQ8N292 157 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 SAMD12Q8N8I0 201 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 OR9G1Q8NH87 305 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
SSBP3-208ENST00000444533 SSMEM1Q8WWF3 244 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 KIRREL1Q96J84 757 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 LINC00574Q9H8X3 128 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 TAF9BQ9HBM6 251 aa11.5□□□□□ -0.57
SSBP3-208ENST00000444533 MBNL3Q9NUK0 354 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms