RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ASB4Q9Y574 426 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 ZNF608Q9ULD9 1512 aaPredicted RBP3.41□□□□□ -1.86
VPS50-206ENST00000443443 FER1L5A0AVI2 2057 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 A0A1B0GXF2 115 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 CIB4A0PJX0 185 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 MAP1LC3B2A6NCE7 125 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 LINC00587B1AMM8 73 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 H3BP45 60 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 K7EPK0 472 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 M0QYV0 167 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 FAAHO00519 579 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 SPAG7O75391 227 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 DHRS3O75911 302 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 OR2A4O95047 310 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 HBZP02008 142 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 LMO2P25791 158 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 TALDO1P37837 337 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 CCR6P51684 374 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 NCBP2P52298 156 aaKnown RBP eCLIP3.41□□□□□ -1.86
VPS50-206ENST00000443443 TAS2R19P59542 299 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 C1QTNF8P60827 252 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 HPCAP84074 193 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 ARFRP1Q13795 201 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 HERPUD1Q15011 391 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 PAFAH1B3Q15102 231 aaKnown RBP3.41□□□□□ -1.86
VPS50-206ENST00000443443 SMIM21Q3B7S5 101 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 ATP6AP1LQ52LC2 224 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 C9orf66Q5T8R8 295 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 TSPO2Q5TGU0 170 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 SPATA31B1PQ5VZV4 182 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 CXCL17Q6UXB2 119 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 TOMM20LQ6UXN7 152 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 IDO2Q6ZQW0 420 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 H2AFVQ71UI9 128 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 OOSP2Q86WS3 158 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 ANGPTL5Q86XS5 388 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 ZBTB8OSQ8IWT0 167 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 OR2G3Q8NGZ4 309 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 CD200R1Q8TD46 325 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 DNAJC9Q8WXX5 260 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 RNF185Q96GF1 192 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 FCRL1Q96LA6 429 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 OR2A7Q96R45 310 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 KLF6Q99612 283 aaPredicted RBP3.41□□□□□ -1.86
VPS50-206ENST00000443443 CDX2Q99626 313 aaPredicted RBP3.41□□□□□ -1.86
VPS50-206ENST00000443443 ZNF184Q99676 751 aaPredicted RBP3.41□□□□□ -1.86
VPS50-206ENST00000443443 SFXN3Q9BWM7 321 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 SLC17A9Q9BYT1 436 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 MAP1LC3BQ9GZQ8 125 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 FAM96AQ9H5X1 160 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 HES4Q9HCC6 221 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 TNFRSF19Q9NS68 423 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 AIG1Q9NVV5 245 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 SIGLEC7Q9Y286 467 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 HDGFL3Q9Y3E1 203 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 ZNF780BQ9Y6R6 833 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 NPHP4O75161 1426 aaPredicted RBP3.41□□□□□ -1.86
VPS50-206ENST00000443443 PIK3C2GO75747 1445 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 YTHDC2Q9H6S0 1430 aaKnown RBP3.41□□□□□ -1.86
VPS50-206ENST00000443443 ASTN1O14525 1302 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 CLUHO75153 1309 aa3.41□□□□□ -1.86
VPS50-206ENST00000443443 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 C5orf49A4QMS7 147 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 PGPA6NDG6 321 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ARL5CA6NH57 179 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 G3V2T6 193 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 COPEO14579 308 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 PSPHP1O15172 72 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 CCDC22O60826 627 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 CEP152O94986 1710 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 PDYNP01213 254 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ATP5G1P05496 136 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 COX4I1P13073 169 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 GZMHP20718 246 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 GABRR1P24046 479 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ERP29P30040 261 aaKnown RBP3.4□□□□□ -1.87
VPS50-206ENST00000443443 PRSS3P35030 304 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 APLNRP35414 380 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 CTRLP40313 264 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 AKR1C3P42330 323 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ZNF133P52736 654 aaPredicted RBP3.4□□□□□ -1.87
VPS50-206ENST00000443443 DAD1P61803 113 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 PRDX4Q13162 271 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 KIAA0087Q14695 138 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 OR2B11Q5JQS5 317 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
VPS50-206ENST00000443443 AKR1C8PQ5T2L2 129 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 TMEM78Q5T7P6 136 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 TMEM236Q5W0B7 351 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 LEMD1Q68G75 181 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 NANOGP8Q6NSW7 305 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 LPCAT3Q6P1A2 487 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 TMUB2Q71RG4 321 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 ZNF589Q86UQ0 364 aaPredicted RBP3.4□□□□□ -1.87
VPS50-206ENST00000443443 DOLPP1Q86YN1 238 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 FAM24BQ8N5W8 94 aa3.4□□□□□ -1.87
VPS50-206ENST00000443443 TMEM252Q8N6L7 170 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms