RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PLEKHJ1Q9NW61 149 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 AK3Q9UIJ7 227 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 KCNK7Q9Y2U2 307 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 SESN1Q9Y6P5 492 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 A0A0U1RQK1 487 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 hCG_1809904A0A1W2PP81 198 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 A0A1W2PPE2 198 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 A0A1W2PR64 198 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 A0A1W2PRV1 198 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 FAM172BPA6NC97 362 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 NPIPB11E5RHQ5 1161 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 C15orf65H3BRN8 121 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 RANBP1P43487 201 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 FAM53AQ6NSI3 398 aaPredicted RBP13.05□□□□□ -0.32
USP39-205ENST00000442708 Q6ZTK2 550 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 CLVS1Q8IUQ0 354 aaPredicted RBP13.05□□□□□ -0.32
USP39-205ENST00000442708 SIGLECL1Q8N7X8 197 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 ZNF565Q8N9K5 539 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 OR56B1Q8NGI3 324 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 OR10R2Q8NGX6 335 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 SLC25A46Q96AG3 418 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 KIRREL1Q96J84 757 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 SUCNR1Q9BXA5 334 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 ATG5Q9H1Y0 275 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 HEXA-AS1Q9H8Q6 139 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 HSF4Q9ULV5 492 aa13.05□□□□□ -0.32
USP39-205ENST00000442708 FBN1P35555 2871 aaKnown RBP13.05□□□□□ -0.32
USP39-205ENST00000442708 H3BUI4 141 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 CA11O75493 328 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 NAPSAO96009 420 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 FPR2P25090 351 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 SAA4P35542 130 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 BPIFB3P59826 476 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 GUCA2AQ02747 115 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 SPCS2Q15005 226 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 LDLRAD2Q5SZI1 272 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 TMEM133Q9H2Q1 129 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 ESM1Q9NQ30 184 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 ELF5Q9UKW6 265 aaPredicted RBP13.04□□□□□ -0.32
USP39-205ENST00000442708 TRAPPC2LQ9UL33 140 aa13.04□□□□□ -0.32
USP39-205ENST00000442708 IGHV2-26A0A0B4J1V2 119 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 ODF3BA8MYP8 253 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 C12orf77C9JDV5 145 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 VENTXO95231 258 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 GNB3P16520 340 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 GZMHP20718 246 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 PAX6P26367 422 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 LTC4SQ16873 150 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 LHFPL4Q7Z7J7 247 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 OR11H6Q8NGC7 330 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 LEAP2Q969E1 77 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 RAB3CQ96E17 227 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 DCSTAMPQ9H295 470 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 ZMAT3Q9HA38 289 aaKnown RBP13.03□□□□□ -0.32
USP39-205ENST00000442708 ZNF286AQ9HBT8 521 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 MBNL3Q9NUK0 354 aaKnown RBP13.03□□□□□ -0.32
USP39-205ENST00000442708 RHBDL2Q9NX52 303 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 IDI2-AS1Q9NZ38 188 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 ZNRD1Q9P1U0 126 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 SPATA2Q9UM82 520 aa13.03□□□□□ -0.32
USP39-205ENST00000442708 MEIOCA2RUB1 952 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 MFNGO00587 321 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 ORC5O43913 435 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 IGHV3-7P01780 117 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 NFYBP25208 207 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 SCAND1P57086 179 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 SCGB2A2Q13296 93 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 ZNF626Q68DY1 528 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 ZNF880Q6PDB4 577 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 CROCCP3Q8IVE0 287 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 OR13D1Q8NGV5 346 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 OR1L1Q8NH94 360 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 ARL11Q969Q4 196 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 PRDM13Q9H4Q3 707 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 ETV7Q9Y603 341 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 CEPT1Q9Y6K0 416 aa13.02□□□□□ -0.33
USP39-205ENST00000442708 A0A075B6Q4 140 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 A0A087X0M5 115 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 A0A1B0GX30 115 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 METTL21EPA6NDL7 271 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 IFNA2P01563 188 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 ARG1P05089 322 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 HIST1H1DP16402 221 aaKnown RBP13.01□□□□□ -0.33
USP39-205ENST00000442708 CD34P28906 385 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 TMBIM6P55061 237 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 LOXL3P58215 753 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 HILS1P60008 231 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 MIDNQ504T8 468 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 DYNAPQ8N1N2 210 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 ABHD12Q8N2K0 398 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 ZDHHC22Q8N966 263 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 ZNF418Q8TF45 676 aaPredicted RBP13.01□□□□□ -0.33
USP39-205ENST00000442708 DUX5Q96PT3 197 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 CLEC7AQ9BXN2 247 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 TAF9BQ9HBM6 251 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 ABRACLQ9P1F3 81 aa13.01□□□□□ -0.33
USP39-205ENST00000442708 ATRQ13535 2644 aa13□□□□□ -0.33
USP39-205ENST00000442708 TRBV6-6A0A0A6YYG2 114 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms