RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 COA4Q9NYJ1 87 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR5AC2Q9NZP5 309 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 MBD2Q9UBB5 411 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 PFDN2Q9UHV9 154 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 IGKV1D-8A0A087WSZ0 117 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 A0A1W2PP11 408 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 MEX3AA1L020 520 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 C9JQL5 133 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 FCGR3AP08637 254 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 GLRA1P23415 457 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 PAX6P26367 422 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 CCKARP32238 428 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR8B12Q8NGG6 310 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 TNFAIP8L1Q8WVP5 186 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR10C1Q96KK4 312 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR2V2Q96R30 315 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 FOXC2Q99958 501 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM138Q9NPI0 162 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 MYEF2Q9P2K5 600 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZDHHC8Q9ULC8 765 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 CD300LBA8K4G0 201 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 C17orf100A8MU93 164 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 NDUFB3O43676 98 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 CA11O75493 328 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 HIST1H1DP16402 221 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 GABRR1P24046 479 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR3A4PP47883 348 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 ELP2Q6IA86 826 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 BTNL8Q6UX41 500 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF627Q7L945 461 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 JAGN1Q8N5M9 183 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 SEC22AQ96IW7 307 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 NKX6-2Q9C056 277 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 C1orf123Q9NWV4 160 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 SETXQ7Z333 2677 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 PPIAL4EA0A075B759 164 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 A0A1W2PPH5 198 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 PPIAL4DF5H284 164 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 SFT2D2O95562 160 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 GSTP1P09211 210 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 PPIAL4FP0DN26 164 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF44P15621 663 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 CLEC18BQ6UXF7 455 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF101Q8IZC7 436 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 BATF2Q8N1L9 274 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 SEMA6DQ8NFY4 1073 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 TERB2Q8NHR7 220 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM54Q969K7 222 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF442Q9H7R0 627 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 RAB18Q9NP72 206 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 PPIAL4AQ9Y536 164 aa6.26□□□□□ -1.41
CDC42BPA-208ENST00000442054 GPR31O00270 319 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 FOXH1O75593 365 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 PGAM2P15259 253 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ATF4P18848 351 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 PSMB6P28072 239 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ADIPOQQ15848 244 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM128Q5BJH2 165 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 DMRTC1Q5HYR2 192 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 LIN54Q6MZP7 749 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ASCL4Q6XD76 172 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 FAM185AQ8N0U4 392 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 MARCH1Q8TCQ1 289 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 DACT3Q96B18 629 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 PCGF1Q9BSM1 259 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 SELENOIQ9C0D9 397 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 TLNRD1Q9H1K6 362 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 OPA3Q9H6K4 179 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 C12orf4Q9NQ89 552 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF391Q9UJN7 358 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 TRAV38-1A0A0B4J264 116 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF850A8MQ14 1090 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 RPL36A-HNRNPH2H7BZ11 118 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 TSPAN4O14817 238 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMPRSS2O15393 492 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 RAC2P15153 192 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 LRRC10Q5BKY1 277 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 HAGHLQ6PII5 290 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF584Q8IVC4 421 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ARRDC1Q8N5I2 433 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 MOB1AQ9H8S9 216 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 ONECUT1Q9UBC0 465 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 PIGLQ9Y2B2 252 aa6.25□□□□□ -1.41
CDC42BPA-208ENST00000442054 A0A1W2PRD5 423 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 A0A1W2PRF3 423 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 A0A1W2PRM7 423 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 RNF212BA8MTL3 300 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 DISC1C4P0D8 188 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 TRAPPC2LH3BP13 241 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 FOLR2P14207 255 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 RAB3AP20336 220 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 ENDOGQ14249 297 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 EDDM3AQ14507 147 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 CNN3Q15417 329 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 C10orf128Q5T292 105 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 GPR157Q5UAW9 335 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 PRSS54Q6PEW0 395 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMED4Q7Z7H5 227 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms