RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CDS2O95674 445 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 LSM8O95777 96 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 UBBP0CG47 229 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 TBPP20226 339 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 HTR1DP28221 377 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 GGT2P36268 569 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 FBXW4P57775 412 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 NCALDP61601 193 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 ARG2P78540 354 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 TRMT12Q53H54 448 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 CLEC12AQ5QGZ9 265 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 FAM162BQ5T6X4 162 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 TRIM40Q6P9F5 258 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 DCUN1D2Q6PH85 259 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 STRADAQ7RTN6 431 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 PIANPQ8IYJ0 282 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 UBALD2Q8IYN6 164 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 GATD1Q8NB37 220 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLC30A7Q8NEW0 376 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR10G4Q8NGN3 311 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 TERB2Q8NHR7 220 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF564Q8TBZ8 553 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 VN1R17PQ8TDU5 208 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 GPR119Q8TDV5 335 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 HIST1H2BAQ96A08 127 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR7D2Q96RA2 312 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 CMSS1Q9BQ75 279 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 EFCAB11Q9BUY7 163 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 RIOK2Q9BVS4 552 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 CST9LQ9H4G1 147 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 TMEM38BQ9NVV0 291 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 METTL1Q9UBP6 276 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 NALCNQ8IZF0 1738 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 TMEM2Q9UHN6 1383 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 CLIP1P30622 1438 aa3.16□□□□□ -1.9
CDC42BPA-207ENST00000441725 ISPDA4D126 451 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 ARL5CA6NH57 179 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 SIGLEC16A6NMB1 481 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 I3L4J1 428 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 CORTO00230 105 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 CD8AP01732 235 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 PSMB1P20618 241 aaKnown RBP3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 GPM6AP51674 278 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 UBE2E1P51965 193 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 PIGPP57054 158 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 TGFBR3Q03167 851 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 PLCXD2Q0VAA5 305 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 SHHQ15465 462 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 KRTAP24-1Q3LI83 254 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 SCGB2B2Q4G0G5 96 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 OPN5Q6U736 354 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 TEX261Q6UWH6 196 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 WDR82Q6UXN9 313 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 DEFB128Q7Z7B8 93 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 CBLN2Q8IUK8 224 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 PRR22Q8IZ63 422 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 FTMTQ8N4E7 242 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 UBAC2Q8NBM4 344 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 CSNK1G2-AS1Q8NCQ2 148 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 TSTD1Q8NFU3 115 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 ORAOV1Q8WV07 137 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 LRRC58Q96CX6 371 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 BTF3L4Q96K17 158 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 C18orf12Q96KH6 178 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLC35G5Q96KT7 338 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 HSFY1Q96LI6 401 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 UBE2E2Q96LR5 201 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR2M2Q96R28 347 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 HES7Q9BYE0 225 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 PTGES2Q9H7Z7 377 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 HEXA-AS1Q9H8Q6 139 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 SCP2D1Q9UJQ7 156 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 PROCRQ9UNN8 238 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 KLF12Q9Y4X4 402 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 PHIPQ8WWQ0 1821 aa3.15□□□□□ -1.9
CDC42BPA-207ENST00000441725 CDC42BPBQ9Y5S2 1711 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 PLXND1Q9Y4D7 1925 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 DOCK3Q8IZD9 2030 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 A0A0G2JRQ6 117 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM166BA8MTA8 275 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 CEACAM18A8MTB9 384 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 CCL21O00585 134 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 DEGS1O15121 323 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 GALR3O60755 368 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 LYPLA1O75608 230 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR7C1O76099 320 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 KBTBD11O94819 623 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGHV2-5P01817 119 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 REG1AP05451 166 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 KIR2DS2P43631 304 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 GZMMP51124 257 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 MXD1Q05195 221 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 SNRNP35Q16560 246 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 LRRC26Q2I0M4 334 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 ATP6AP1LQ52LC2 224 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM182AQ5T1J6 154 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 HBMQ6B0K9 141 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 LAMTOR1Q6IAA8 161 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 CXCL17Q6UXB2 119 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms