RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PSG11Q9UQ72 335 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 PLXNB1O43157 2135 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 NPIPB11E5RHQ5 1161 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 PTGES3LE9PB15 166 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 M0QZK8 103 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 SDCBPO00560 298 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 CRTAPO75718 401 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 OPN1MWP04001 364 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 LPLP06858 475 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 OPN1MW2P0DN77 364 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 OPN1MW3P0DN78 364 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 CGB3P0DN86 165 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 CGB7P0DN87 165 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 GZMHP20718 246 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 EMX1Q04741 257 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 LAIR2Q6ISS4 152 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 CENPVQ7Z7K6 275 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 NDUFA11Q86Y39 141 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 FBLIM1Q8WUP2 373 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 TFAP2CQ92754 450 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 MYDGFQ969H8 173 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 ARL11Q969Q4 196 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 R3HDM4Q96D70 268 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 MRPS24Q96EL2 167 aaKnown RBP15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 CITED2Q99967 270 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 SELENOIQ9C0D9 397 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 RAB9BQ9NP90 201 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 TRAPPC2LQ9UL33 140 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 MOB4Q9Y3A3 225 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 TGP01266 2768 aa15.88■□□□□ 0.13
SHROOM1-204ENST00000440118 A0A1W2PPE3 182 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 A0A1W2PRX2 142 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 LY6LH3BQJ8 138 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 RAB7AP51149 207 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 KHDC1LQ5JSQ8 128 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 RAB12Q6IQ22 244 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 SLC16A12Q6ZSM3 486 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 DRAM1Q8N682 238 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 NANOGP1Q8N7R0 232 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 OR5AU1Q8NGC0 362 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 UBALD1Q8TB05 177 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 WNT10AQ9GZT5 417 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 BANF2Q9H503 90 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 LINC00574Q9H8X3 128 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 ETAA1Q9NY74 926 aa15.87■□□□□ 0.13
SHROOM1-204ENST00000440118 SH2D7A6NKC9 451 aaPredicted RBP15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 CD1AP06126 327 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 CDK1P06493 297 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 SNRNP70P08621 437 aaKnown RBP15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 MGMTP16455 207 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 TMEM11P17152 192 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 IL3RAP26951 378 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 GPR50Q13585 617 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 MED22Q15528 200 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 CDH26Q8IXH8 852 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 OR4X2Q8NGF9 303 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 TMED9Q9BVK6 235 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 CST11Q9H112 138 aa15.86■□□□□ 0.13
SHROOM1-204ENST00000440118 HSD17B6O14756 317 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 SPINT2O43291 252 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 PF4V1P10720 104 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 AQP4P55087 323 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 RBM48Q5RL73 367 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 C6orf183Q5T699 404 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 ZNF497Q6ZNH5 498 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 OR8H3Q8N146 312 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 PRR18Q8N4B5 295 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 MS4A15Q8N5U1 240 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 FAM46BQ96A09 425 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 OCSTAMPQ9BR26 566 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 UQCC2Q9BRT2 126 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 FKBP14Q9NWM8 211 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 GNG12Q9UBI6 72 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 PEX16Q9Y5Y5 336 aa15.85■□□□□ 0.13
SHROOM1-204ENST00000440118 IGHV3-43A0A0B4J1X8 118 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 A0A1W2PPI3 338 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 CCRL2O00421 344 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 ORC5O43913 435 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 IGHV3-43DP0DP04 118 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 FBLN7Q53RD9 439 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 C6orf141Q5SZD1 244 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 MOB3BQ86TA1 216 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 OR4K15Q8NH41 348 aa15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 RCC2Q9P258 522 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 NKX1-2Q9UD57 310 aaPredicted RBP15.84■□□□□ 0.13
SHROOM1-204ENST00000440118 TCRBV4S1A1TA0A5B7 111 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 PIN1P1O15428 100 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 IGKV1D-33P01593 117 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 IGKV1-33P01594 117 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 MT-ND4P03905 459 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 GAPDHP04406 335 aaKnown RBP15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 REG1BP48304 166 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 DIAPH2-AS1Q14236 149 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 HNF4GQ14541 408 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 SPHARQ15513 63 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 ACSM3Q53FZ2 586 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 NKAPLQ5M9Q1 402 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 SYT6Q5T7P8 510 aaPredicted RBP15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 THNSL2Q86YJ6 484 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 OR52M1Q8NGK5 317 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms