RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CKLFQ9UBR5 152 aa16.15■□□□□ 0.18
NCKIPSD-206ENST00000439518 A0A1W2PRX2 142 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 C15orf65H3BRN8 121 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 SNRNP70P08621 437 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 CAPGP40121 348 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 GNG10P50151 68 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 RAB7AP51149 207 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 OR8H3Q8N146 312 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 WFDC9Q8NEX5 89 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 FBLIM1Q8WUP2 373 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 OR14A2Q96R54 314 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 PLCXD1Q9NUJ7 323 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 PSORS1C1Q9UIG5 152 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 MOB4Q9Y3A3 225 aa16.14■□□□□ 0.17
NCKIPSD-206ENST00000439518 PRB2P02812 416 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 MT-ND4P03905 459 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 TAS2R43P59537 309 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 DOC2BQ14184 412 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 GPR176Q14439 515 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 ATAD3CQ5T2N8 411 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 C10orf99Q6UWK7 81 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 ZNF497Q6ZNH5 498 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 LYPD6Q86Y78 171 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 C8orf59Q8N0T1 100 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 OR52M1Q8NGK5 317 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 MYDGFQ969H8 173 aa16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 MRPS24Q96EL2 167 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 RCC2Q9P258 522 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 TSSC4Q9Y5U2 329 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-206ENST00000439518 A0A1W2PPK0 400 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 TCRBV4S1A1TA0A5B7 111 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 CD1AP06126 327 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 OGFRL1Q5TC84 451 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 CDH26Q8IXH8 852 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 OR10X1Q8NGY0 326 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 ARL11Q969Q4 196 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 MUL1Q969V5 352 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 DERL3Q96Q80 235 aa16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 MRPS28Q9Y2Q9 187 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-206ENST00000439518 PNMA8CA0A1B0GUJ8 204 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 A0A1W2PPE3 182 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 CASQ2O14958 399 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 PIN1P1O15428 100 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 ORC5O43913 435 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 LOXL3P58215 753 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 ZNF816Q0VGE8 651 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 C9orf152Q5JTZ5 239 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 GLIPR1L1Q6UWM5 242 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 Q6ZPA2 131 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 REC114Q7Z4M0 266 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 JAGN1Q8N5M9 183 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 LINC00311Q8N616 119 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 C5orf56Q8N8D9 126 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 C8orf31Q8N9H6 132 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 OR4X2Q8NGF9 303 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 CCDC107Q8WV48 283 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 SPACA1Q9HBV2 294 aa16.11■□□□□ 0.17
NCKIPSD-206ENST00000439518 HSD17B6O14756 317 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 TMEM11P17152 192 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 CELP19835 753 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 WNT4P56705 351 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 EBI3Q14213 229 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 HES1Q14469 280 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 FAM53AQ6NSI3 398 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 AHSA2Q719I0 299 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 UBALD1Q8TB05 177 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 NEK7Q8TDX7 302 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 PHF21AQ96BD5 680 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 FKBP14Q9NWM8 211 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 GFOD1Q9NXC2 390 aa16.1■□□□□ 0.17
NCKIPSD-206ENST00000439518 CCRL2O00421 344 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 SDCBPO00560 298 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 FGF16O43320 207 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 IGKV1D-33P01593 117 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 IGKV1-33P01594 117 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 GAPDHP04406 335 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 PF4V1P10720 104 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 HNF4GQ14541 408 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 GAPTQ8N292 157 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 STX19Q8N4C7 294 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 NANOGP1Q8N7R0 232 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 BPIFB6Q8NFQ5 453 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 ST6GALNAC6Q969X2 333 aa16.09■□□□□ 0.17
NCKIPSD-206ENST00000439518 IGHV1-3A0A0C4DH29 117 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 MCRIP1C9JLW8 97 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 AIPO00170 330 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 MYL12BO14950 172 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 MAS1P04201 325 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 CD33P20138 364 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 REG1BP48304 166 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 Q3ZCU0 254 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 RAB12Q6IQ22 244 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 TMEM104Q8NE00 496 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 BANF2Q9H503 90 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 NECAP2Q9NVZ3 263 aa16.08■□□□□ 0.16
NCKIPSD-206ENST00000439518 PSMB11A5LHX3 300 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 FAM90A10PA6NDY2 464 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 FAM90A7PA6NKC0 464 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 FAM90A23PA8MXZ1 464 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 C12orf77C9JDV5 145 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms