RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 UCP3P55916 312 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 ZNF441Q8N8Z8 693 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 LRTM2Q8N967 370 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 CCDC71LQ8N9Z2 235 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 DIRC2Q96SL1 478 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 TMEM204Q9BSN7 226 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 PRSS50Q9UI38 385 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-204ENST00000438964 PIAS3Q9Y6X2 628 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 DOCK10Q96BY6 2186 aa11.5□□□□□ -0.57
ACTN1-204ENST00000438964 UBE2L5PA0A1B0GUS4 154 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 ZNF737O75373 536 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 OPN1MWP04001 364 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 OPN1MW2P0DN77 364 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 OPN1MW3P0DN78 364 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 SELEP16581 610 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 MSR1P21757 451 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 RND2P52198 227 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 NOL4LQ96MY1 436 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-204ENST00000438964 A0A1W2PNV4 684 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 BLACEA4D250 179 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 MAP1LC3B2A6NCE7 125 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 M0R143 59 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 TRAPPC6AO75865 159 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 IGKV1D-33P01593 117 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 IGKV1-33P01594 117 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 CRYAAP02489 173 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 CCL2P13500 99 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 EDN3P14138 238 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 B4GALT1P15291 398 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 PAX1P15863 534 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 TDGF1P3P51864 188 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 MALLQ13021 153 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 PLCXD3Q63HM9 321 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 GJC3Q8NFK1 279 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 OR4F5Q8NH21 305 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 SCGB1C1Q8TD33 95 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 PP6455Q8WZ26 134 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 LHX4Q969G2 390 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 ALKBH3Q96Q83 286 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-204ENST00000438964 OR4F4Q96R69 305 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 MAP1LC3BQ9GZQ8 125 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 SMDT1Q9H4I9 107 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 PAM16Q9Y3D7 125 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 GTF3C1Q12789 2109 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 C1QTNF9BB2RNN3 333 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 CELA2AP08217 269 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 IRF2P14316 349 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 GALNSP34059 522 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 TRA2AQ13595 282 aaKnown RBP eCLIP11.49□□□□□ -0.575e-6■■■■□ 22.5
ACTN1-204ENST00000438964 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 C9orf135Q5VTT2 229 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 ACTR3CQ9C0K3 210 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-204ENST00000438964 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 V9GYS6 101 aa11.49□□□□□ -0.57
ACTN1-204ENST00000438964 CDS2O95674 445 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 HBE1P02100 147 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
ACTN1-204ENST00000438964 PSG2P11465 335 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 CD81P60033 236 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 ZXDAP98168 799 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 CFHR1Q03591 330 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 OR51G1Q8NGK1 321 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 CDCA3Q99618 268 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-204ENST00000438964 SRD5A3Q9H8P0 318 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 FKBP11Q9NYL4 201 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 KIAA1324LA8MWY0 1029 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-204ENST00000438964 NRASP01111 189 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
ACTN1-204ENST00000438964 SPINK9Q5DT21 86 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 OR6X1Q8NH79 312 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 HLA-CQ95604 372 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 ZNF488Q96MN9 340 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 OR5B12Q96R08 314 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
ACTN1-204ENST00000438964 UBE2G2P60604 165 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 TOMM20LQ6UXN7 152 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 RTL10Q7L3V2 364 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 OR10V1Q8NGI7 309 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 EXTL1Q92935 676 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 GPR146Q96CH1 333 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 ANGPTL4Q9BY76 406 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 AKIRIN1Q9H9L7 192 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-204ENST00000438964 CRIM1Q9NZV1 1036 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 CACNG5Q9UF02 275 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 LOC400499M0QZD8 3231 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 SLC22A20A6NK97 555 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 MARCH11A6NNE9 402 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 CA11O75493 328 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 TK1P04183 234 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 CST2P09228 141 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 TCN2P20062 427 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 GCH1P30793 250 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 TMEM241Q24JQ0 296 aa11.47□□□□□ -0.57
ACTN1-204ENST00000438964 Q6ZVH6 145 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms