RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DOCK9Q9BZ29 2069 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 TIAF1O95411 115 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 SCTP09683 121 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 OR3A1P47881 315 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 UCP3P55916 312 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FGF12P61328 243 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 KCNMB1Q16558 191 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 HFEQ30201 348 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 DPPA3Q6W0C5 159 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 RFESDQ8TAC1 157 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 POC1BQ8TC44 478 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 CORO2AQ92828 525 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 NEIL1Q96FI4 390 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 SNX22Q96L94 193 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 S1PR3Q99500 378 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 OR2D2Q9H210 308 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 ZDHHC11Q9H8X9 412 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 PRSS50Q9UI38 385 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 TRIOBPQ9H2D6 2365 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FRMPD3Q5JV73 1810 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 TRAV39A0A0B4J263 110 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 XKRY2A2RUG3 117 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 J3QT63 122 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 HSPB1P04792 205 aaKnown RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 MGST1P10620 155 aaKnown RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 PSG2P11465 335 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 HNF1AP20823 631 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 GABRA4P48169 554 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 SRSF3P84103 164 aaKnown RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 ASPHD2Q6ICH7 369 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 BIVMQ86UB2 503 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 OR10A7Q8NGE5 316 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 OR10S1Q8NGN2 331 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM131CQ96AQ9 280 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 CTDSP1Q9GZU7 261 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 TANC1Q9C0D5 1861 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 TRGV5A0A0B4J1U4 118 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 IGKV1-9A0A0C4DH69 117 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A10PA6NDY2 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A18PA6NE21 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A16PA6NEW6 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A20PA6NIJ5 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A8PA6NJQ4 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A7PA6NKC0 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A22PA8MWA6 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A12PA8MX19 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A5PA8MXJ8 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A23PA8MXZ1 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 H0YL77 283 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A15PP0C7V4 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A13PP0C7W8 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A14PP0C7W9 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 FAM90A24PP0C7X0 464 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 BCL2P10415 239 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 NAT2P11245 290 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 KLK2P20151 261 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 CDC34P49427 236 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 CCL11P51671 97 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 TIGITQ495A1 244 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 RIPPLY2Q5TAB7 128 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 CXorf67Q86X51 503 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 LYRM2Q9NU23 88 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 V9GYS6 101 aa5.79□□□□□ -1.48
CSDE1-205ENST00000438362 GOLGB1Q14789 3259 aaKnown RBP5.79□□□□□ -1.48
CSDE1-205ENST00000438362 H0Y980 276 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PTBP3O95758 552 aaKnown RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 CHRNA7P36544 502 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 ERVS71-1P61550 626 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 RND3P61587 244 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 SERF2P84101 59 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF441Q8N8Z8 693 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 OR2T10Q8NGZ9 312 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PLPPR2Q96GM1 343 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 TRIB1Q96RU8 372 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 FAM117AQ9C073 453 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 OR51M1Q9H341 326 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 Q9N2K0 584 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 TUBD1Q9UJT1 453 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 TRBV6-7A0A0A0MS04 114 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 IGHV1-45A0A0A0MS14 117 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 M0R1X1 148 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 LY86O95711 162 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PMELP40967 661 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 ZXDAP98168 799 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 IGFBP7Q16270 282 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 RSPO4Q2I0M5 234 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 CEACAM21Q3KPI0 293 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 NUFIP2Q7Z417 695 aaKnown RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 SLC35E3Q7Z769 313 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 FAM89BQ8N5H3 189 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF383Q8NA42 475 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 LILRB1Q8NHL6 650 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 DNASE2BQ8WZ79 361 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM54Q969K7 222 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PACRGQ96M98 296 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 GPHA2Q96T91 129 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 RARRES2Q99969 163 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 GINS3Q9BRX5 216 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 RSG1Q9BU20 258 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 GPR87Q9BY21 358 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms