RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PRLHRP49683 370 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 RAB7AP51149 207 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 NDUFA8P51970 172 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 IRF8Q02556 426 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 TFF3Q07654 80 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 C5orf64Q2M2E5 130 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 Q6ZS92 163 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 LRRC75AQ8NAA5 344 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 GPR26Q8NDV2 337 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR1L1Q8NH94 360 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 AGR3Q8TD06 166 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 SLC37A2Q8TED4 501 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 RERGQ96A58 199 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 KIAA1143Q96AT1 154 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 ISG20Q96AZ6 181 aaKnown RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 RCN3Q96D15 328 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 C8orf76Q96K31 380 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 KCNS1Q96KK3 526 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 CSPG4P5Q96PW8 444 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 KCNS3Q9BQ31 491 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 AGMATQ9BSE5 352 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 TMEM243Q9BU79 118 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 TIPINQ9BVW5 301 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 ULBP2Q9BZM5 246 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 IL22Q9GZX6 179 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZNF442Q9H7R0 627 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 CISHQ9NSE2 258 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 CHMP5Q9NZZ3 219 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 HS3ST2Q9Y278 367 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZNF257Q9Y2Q1 563 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 TLN2Q9Y4G6 2542 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 SONP18583 2426 aaKnown RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 HERC2O95714 4834 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 SACSQ9NZJ4 4579 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 PKD1L1Q8TDX9 2849 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 SLC22A20A6NK97 555 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 A8MUU9 505 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 F5H5T6 163 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 M0QYV0 167 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 POLR1CO15160 346 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 PSPHP1O15172 72 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 KLRC4O43908 158 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 CTNSO60931 367 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 MPDU1O75352 247 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 KLF7O75840 302 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 CDRT1O95170 752 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 OXTP01178 125 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 PTHP01270 115 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 TNFP01375 233 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGKV1D-16P01601 117 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 RHOCP08134 193 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZNF14P17017 642 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 BMI1P35226 326 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 POLR2IP36954 125 aaKnown RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 ACTR1BP42025 376 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 CA7P43166 264 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 UBE2E1P51965 193 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 YWHAEP62258 255 aaKnown RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 NAB1Q13506 487 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 ELOCQ15369 112 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 DEFB110Q30KQ9 67 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 SLC25A35Q3KQZ1 300 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 PRR9Q5T870 116 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 ULK3Q6PHR2 472 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 FAM183BPQ6ZVS7 135 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 MDP1Q86V88 176 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 GKN2Q86XP6 184 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 DEFB106AQ8N104 65 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 ST20-AS1Q8NBB2 130 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 APCDD1LQ8NCL9 501 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 PROKR2Q8NFJ6 384 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 RXFP4Q8TDU9 374 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 ASZ1Q8WWH4 475 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 PEX13Q92968 403 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 TMEM159Q96B96 161 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 APH1AQ96BI3 265 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 RMI2Q96E14 147 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 UQCC2Q9BRT2 126 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 LLPHQ9BRT6 129 aaKnown RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 SFXN3Q9BWM7 321 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 FRMD8P1Q9BZ68 369 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 FBXO8Q9NRD0 319 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 FBXO6Q9NRD1 293 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 CHRAC1Q9NRG0 131 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 DMAC2Q9NW81 257 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 C21orf62Q9NYP8 219 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 RABL2AQ9UBK7 228 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 SLC23A2Q9UGH3 650 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 WIF1Q9Y5W5 379 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 COMMD3-BMI1R4GMX3 469 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 MGAM2Q2M2H8 2515 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 ABCA4P78363 2273 aa1.47□□□□□ -2.17
HMGB1P31-201ENST00000437242 CENPBD1B2RD01 187 aa1.46□□□□□ -2.18
HMGB1P31-201ENST00000437242 SIVA1O15304 175 aa1.46□□□□□ -2.18
HMGB1P31-201ENST00000437242 TCP1P17987 556 aaKnown RBP1.46□□□□□ -2.18
HMGB1P31-201ENST00000437242 GTF2H1P32780 548 aa1.46□□□□□ -2.18
HMGB1P31-201ENST00000437242 APLNRP35414 380 aa1.46□□□□□ -2.18
HMGB1P31-201ENST00000437242 SERPINB8P50452 374 aa1.46□□□□□ -2.18
HMGB1P31-201ENST00000437242 UBE2IP63279 158 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms