RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 SNX22Q96L94 193 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 CCDC74BQ96LY2 380 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 ZNF488Q96MN9 340 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 WNT5BQ9H1J7 359 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 TMEM38BQ9NVV0 291 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 MAP1BP46821 2468 aaKnown RBP5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 A0A096LPE4 126 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 A0A1W2PPZ6 126 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 PPP1R2P9O14990 202 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 HMGB3O15347 200 aaKnown RBP5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 HSPA12AO43301 675 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 CXCL13O43927 109 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 CDS2O95674 445 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 RFPL3SP0C7P2 107 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 IAPPP10997 89 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 CD200P41217 278 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 GPM6AP51674 278 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 UCP3P55916 312 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 NKX6-1P78426 367 aaPredicted RBP5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 ID3Q02535 119 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 NMSQ5H8A3 153 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 ZNF506Q5JVG8 444 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 PLA2G2CQ5R387 149 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 WDR25Q64LD2 544 aaPredicted RBP5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 TMEM42Q69YG0 159 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 SP5Q6BEB4 398 aaPredicted RBP5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 SLC25A24Q6NUK1 477 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 Q6ZRM9 215 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 CARFQ8N187 725 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 GPR137CQ8N3F9 429 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 SPEM1Q8N4L4 309 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 CPEB3Q8NE35 698 aaKnown RBP5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 CADM4Q8NFZ8 388 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 C10orf35Q96D05 121 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 TMEM56Q96MV1 263 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 RPRMQ9NS64 109 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 TMEM56-RWDD3S4R434 201 aa5.74□□□□□ -1.49
SEMA3A-204ENST00000436949 OR6C6A6NF89 314 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 SEC14L6B5MCN3 397 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 TK1P04183 234 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 NR2C1P13056 603 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 FUT6P51993 359 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 HLA-DRB3P79483 266 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ARL16Q0P5N6 197 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ZNF726P1Q15940 193 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 EXT1Q16394 746 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 HLA-BQ31612 363 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 TMEM211Q6ICI0 200 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 BEND4Q6ZU67 534 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 DMRTC2Q8IXT2 367 aaPredicted RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 NECAP1Q8NC96 275 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 OR1K1Q8NGR3 316 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ABHD3Q8WU67 409 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ZNF845Q96IR2 970 aaPredicted RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 FAM210BQ96KR6 192 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 OR2H1Q9GZK4 316 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 SLC25A31Q9H0C2 315 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 RNF115Q9Y4L5 304 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ADAMTS20P59510 1910 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 PKD1L2Q7Z442 2459 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ARHGAP21Q5T5U3 1957 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 URB1O60287 2271 aaKnown RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 EP300Q09472 2414 aaPredicted RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 A0A087WWC5 75 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ARGFXA6NJG6 315 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ZNF732B4DXR9 585 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 HS3ST1O14792 307 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 YKT6O15498 198 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 HSPB1P04792 205 aaKnown RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 UMODP07911 640 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 METTL15P1P0C7V9 234 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 DSCR4P56555 118 aaPredicted RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ZFP36L1Q07352 338 aaKnown RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 FAM90A2PQ658T7 463 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 MRPL14Q6P1L8 145 aaKnown RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 AAED1Q7RTV5 226 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 PRR18Q8N4B5 295 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 OR56B2PQ8NGI1 322 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 IL1F10Q8WWZ1 152 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ATP5SQ99766 215 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 FOXB1Q99853 325 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 Q9N2K0 584 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 PTRH2Q9Y3E5 179 aaKnown RBP5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 ASPMQ8IZT6 3477 aa5.73□□□□□ -1.49
SEMA3A-204ENST00000436949 CHD6Q8TD26 2715 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 LY6G6EA0A0G2JKS1 128 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 IGHV3-64DA0A0J9YX35 117 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 LOC102723971A0A1B0GUV8 181 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 RPL36A-HNRNPH2H7BZ11 118 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 SYNGR1O43759 233 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 PGLYRP1O75594 196 aaPredicted RBP5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 TRAPPC6AO75865 159 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 VAMP5O95183 116 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 CST2P09228 141 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 PSG2P11465 335 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 HIST1H1BP16401 226 aaKnown RBP5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 VDAC1P21796 283 aa5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 ELLP55199 621 aaPredicted RBP5.72□□□□□ -1.49
SEMA3A-204ENST00000436949 FOXG1P55316 489 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms