RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 CD3DP04234 171 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 GNB3P16520 340 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 TBPP20226 339 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 GLRA1P23415 457 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 LMO1P25800 156 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 SMIM21Q3B7S5 101 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 SPRNQ5BIV9 151 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 FAAP20Q6NZ36 180 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 MOGAT3Q86VF5 341 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 SPICQ8N5J4 248 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 GCSAMQ8N6F7 178 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 LRRC29Q8WV35 223 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 ZNF488Q96MN9 340 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 SLC25A21Q9BQT8 299 aaPredicted RBP9.11□□□□□ -0.95
HMGCL-204ENST00000436439 OCSTAMPQ9BR26 566 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 GINS4Q9BRT9 223 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 TMPRSS13Q9BYE2 586 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 ALX4Q9H161 411 aaPredicted RBP9.11□□□□□ -0.95
HMGCL-204ENST00000436439 SAP30LQ9HAJ7 183 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 DECR2Q9NUI1 292 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 RNF7Q9UBF6 113 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 ZNF222Q9UK12 451 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 ANAPC10Q9UM13 185 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 WIPI2Q9Y4P8 454 aa9.11□□□□□ -0.95
HMGCL-204ENST00000436439 TRAV20A0A0B4J274 112 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 hCG_1807616A0A1W2PRN6 198 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 MEIS3P1A6NDR6 274 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 POM121CA8CG34 1229 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 DISC1C4P0D8 188 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-204ENST00000436439 SH2D1BO14796 132 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 CREBL2O60519 120 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-204ENST00000436439 OR7C1O76099 320 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-204ENST00000436439 IGHV2-5P01817 119 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 CBX5P45973 191 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 ZNF626Q68DY1 528 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 Q6P435 159 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 C12orf54Q6X4T0 127 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 SLC36A1Q7Z2H8 476 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 C6orf201Q7Z4U5 140 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 TRAPPC6BQ86SZ2 158 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 ASCC1Q8N9N2 400 aaKnown RBP9.1□□□□□ -0.95
HMGCL-204ENST00000436439 OR51S1Q8NGJ8 323 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 OR11L1Q8NGX0 322 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 CCDC107Q8WV48 283 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 FAM210AQ96ND0 272 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 GON7Q9BXV9 100 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 ZMAT3Q9HA38 289 aaKnown RBP9.1□□□□□ -0.95
HMGCL-204ENST00000436439 SLC2A8Q9NY64 477 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 IL36RNQ9UBH0 155 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 GLS2Q9UI32 602 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 SCP2D1Q9UJQ7 156 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 ELF5Q9UKW6 265 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-204ENST00000436439 PPP1R3CQ9UQK1 317 aa9.1□□□□□ -0.95
HMGCL-204ENST00000436439 IGHV3-64DA0A0J9YX35 117 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 UBE2QL1A1L167 161 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 LRRC30A6NM36 301 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 FABP7O15540 132 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 SSX5O60225 188 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 FSTL3O95633 263 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 NAT1P18440 290 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 EPHA1P21709 976 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 GNG2P59768 71 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 IKZF1Q13422 519 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 ACTBL2Q562R1 376 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 TEX36Q5VZQ5 186 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 C1orf87Q8N0U7 546 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 BATF2Q8N1L9 274 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 BEST4Q8NFU0 473 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 OR4D10Q8NGI6 311 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 PRRT1Q99946 306 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 SULT4A1Q9BR01 284 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 TMEM246Q9BRR3 403 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 ZNF436Q9C0F3 470 aaPredicted RBP9.09□□□□□ -0.95
HMGCL-204ENST00000436439 WDR13Q9H1Z4 485 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 BEX1Q9HBH7 125 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 IFT46Q9NQC8 304 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 DCAF16Q9NXF7 216 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 ZNF581Q9P0T4 197 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 PCDHB10Q9UN67 800 aa9.09□□□□□ -0.95
HMGCL-204ENST00000436439 TRAV24A0A0B4J272 114 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 MCRIP1C9JLW8 97 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 DEGS1O15121 323 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 SNAPC5O75971 98 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 OR2H2O95918 312 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 HAND1O96004 215 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 AMY2AP04746 511 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 RLN1P04808 185 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 ZNF735P0CB33 412 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 IRF2P14316 349 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 MUC1P15941 1255 aaPredicted RBP9.08□□□□□ -0.96
HMGCL-204ENST00000436439 EGR1P18146 543 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 CXCL3P19876 107 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 ANXA7P20073 488 aaKnown RBP9.08□□□□□ -0.96
HMGCL-204ENST00000436439 DTYMKP23919 212 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 MDH2P40926 338 aaKnown RBP9.08□□□□□ -0.96
HMGCL-204ENST00000436439 HILS1P60008 231 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 PAX5Q02548 391 aa9.08□□□□□ -0.96
HMGCL-204ENST00000436439 ARFRP1Q13795 201 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms