RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ERVK-16P61578 105 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 PNRC1Q12796 327 aaPredicted RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 PTPMT1Q8WUK0 201 aaPredicted RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 TM4SF19Q96DZ7 209 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 RBKSQ9H477 322 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 B3GAT1Q9P2W7 334 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 KIR2DL5BA0A0G2JN68 375 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 KIR2DL5BA0A0G2JPC4 375 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 H0Y8X5 98 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 NDUFS8O00217 210 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 CCL25O15444 150 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM267Q0VDI3 215 aaPredicted RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 IZUMO4Q1ZYL8 232 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 COL5A1-AS1Q5SY13 56 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 KIR2DL5AQ8N109 375 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF519Q8TB69 540 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 CIB3Q96Q77 187 aaPredicted RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 RBM24Q9BX46 236 aaKnown RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 FAM60AQ9NP50 221 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 ANXA10Q9UJ72 324 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF320A2RRD8 509 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM50AO95807 157 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 S100A4P26447 101 aaKnown RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 KISS1Q15726 138 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ARHGEF39Q8N4T4 335 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 SLC38A9Q8NBW4 561 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF845Q96IR2 970 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 WWTR1Q9GZV5 400 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 BET1LQ9NYM9 111 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 IGKV1-9A0A0C4DH69 117 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 IGHEP01854 428 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 DRD3P35462 400 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF121P58317 390 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 CST6Q15828 149 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 FBXW9Q5XUX1 488 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 LEMD1Q68G75 181 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 NUP37Q8NFH4 326 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 OR2T10Q8NGZ9 312 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 PLEKHF2Q9H8W4 249 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM241Q24JQ0 296 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 LYSMD4Q5XG99 296 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 NUFIP2Q7Z417 695 aaKnown RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF695Q8IW36 515 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 OR8B12Q8NGG6 310 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 OR5A2Q8NGI9 324 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 OR51G1Q8NGK1 321 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM170AQ8WVE7 144 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 FAM103A1Q9BTL3 118 aaKnown RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 VAMP8Q9BV40 100 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 PLK3Q9H4B4 646 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ARL2-SNX15V9GYD0 113 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 RER1O15258 196 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ADAM20O43506 726 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 CHST1O43916 411 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 IL6RP08887 468 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 EGR1P18146 543 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 LTC4SQ16873 150 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 FAM78BQ5VT40 261 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 RABEPKQ7Z6M1 372 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 HLA-CQ95604 372 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 NOTCH4Q99466 2003 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 MIEN1Q9BRT3 115 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 KLHL13Q9P2N7 655 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 FAM186AA6NE01 2351 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 TMED7-TICAM2A0A0A6YYA0 188 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 RRP8O43159 456 aaKnown RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 PDGFBP01127 241 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 FAHP16930 419 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 GALNSP34059 522 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 HIST1H3AP68431 136 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 KHDC1LQ5JSQ8 128 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 TCF23Q7RTU1 214 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 MRPL21Q7Z2W9 205 aaKnown RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 STPG4Q8N801 248 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 GNPNAT1Q96EK6 184 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ACY3Q96HD9 319 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF160Q9HCG1 818 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 ZFP30Q9Y2G7 519 aa6.48□□□□□ -1.37
CPSF6-202ENST00000435070 CRYABP02511 175 aaKnown RBP6.47□□□□□ -1.37
CPSF6-202ENST00000435070 CDKN1AP38936 164 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 LIPHQ8WWY8 451 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 DNASE2BQ8WZ79 361 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 HSPB9Q9BQS6 159 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 OR51I2Q9H344 312 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 KIR3DX1Q9H7L2 352 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 CXorf51AA0A1B0GTR3 108 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 ANKRD30BLA7E2S9 258 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 CARD18P57730 90 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 RUNX3Q13761 415 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF77Q15935 545 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 C9orf135Q5VTT2 229 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 RNF133Q8WVZ7 376 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 SPTSSAQ969W0 71 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 MSI2Q96DH6 328 aaKnown RBP6.47□□□□□ -1.37
CPSF6-202ENST00000435070 PIMREGQ9BSJ6 248 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 TRAPPC1Q9Y5R8 145 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 F5H5K5 113 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 GUSBP08236 651 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 RPS18P62269 152 aaKnown RBP6.47□□□□□ -1.37
CPSF6-202ENST00000435070 BTF3L4Q96K17 158 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms