RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ARGFXA6NJG6 315 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 EVPLLA8MZ36 301 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 C9JQL5 133 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 F5H5K5 113 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 M0QZ92 97 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 MFNGO00587 321 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 PFDN6O15212 129 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 CYTH3O43739 400 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 OR7C2O60412 319 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 CDRT1O95170 752 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 GTF2F2P13984 249 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 ORM2P19652 201 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 IFNGR2P38484 337 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 REG1BP48304 166 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 GDI2P50395 445 aaKnown RBP1.52□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF83P51522 516 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 MLLT11Q13015 90 aaPredicted RBP1.52□□□□□ -2.17
PTPN4-205ENST00000433888 FAM53BQ14153 422 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 LINC00303Q3SY05 128 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 GLYATQ6IB77 296 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 MORN3Q6PF18 240 aaPredicted RBP1.52□□□□□ -2.17
PTPN4-205ENST00000433888 BRD3OSQ6XYD6 125 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 SLC13A5Q86YT5 568 aaPredicted RBP1.52□□□□□ -2.17
PTPN4-205ENST00000433888 SGPP2Q8IWX5 399 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 ZFP82Q8N141 532 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 PACRGLQ8N7B6 248 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 YIPF7Q8N8F6 280 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 STOML3Q8TAV4 291 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 C17orf50Q8WW18 174 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 CLDN23Q96B33 292 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 OTUB2Q96DC9 234 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 RMI2Q96E14 147 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 MBOAT7Q96N66 472 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 OLFM3Q96PB7 478 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 EBPLQ9BY08 206 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 ARL6Q9H0F7 186 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 GABARAPL1Q9H0R8 117 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 METTL9Q9H1A3 318 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 KCNIP2Q9NS61 270 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF586Q9NXT0 402 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 COMMD9Q9P000 198 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 DHCR7Q9UBM7 475 aaKnown RBP1.52□□□□□ -2.17
PTPN4-205ENST00000433888 HMGXB4Q9UGU5 601 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 SLC22A7Q9Y694 548 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 MUC6Q6W4X9 2439 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 SIGLEC1Q9BZZ2 1709 aa1.52□□□□□ -2.17
PTPN4-205ENST00000433888 SVILO95425 2214 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 RAB3GAP2Q9H2M9 1393 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 USP42Q9H9J4 1324 aaKnown RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 TRIP11Q15643 1979 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 TGIF2-C20orf24A0A0A6YYL0 155 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 A8MUU9 505 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 A8MWP4 228 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 C16orf90A8MZG2 172 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 RPL36A-HNRNPH2H7BZ11 118 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 CCRL2O00421 344 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 IGKV1D-33P01593 117 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 IGKV1-33P01594 117 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 CISD3P0C7P0 127 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 INAFM2P0DMQ5 153 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 CGB3P0DN86 165 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 CGB7P0DN87 165 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 CD99P14209 185 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 GABRA3P34903 492 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 PPP1CCP36873 323 aaKnown RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 HSPA13P48723 471 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 TGM4P49221 684 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 GABARAPL2P60520 117 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 HPCAP84074 193 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 FAM3AP98173 230 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 GTF2BQ00403 316 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 FUT5Q11128 374 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 SKP2Q13309 424 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 TRMT12Q53H54 448 aaKnown RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 COQ5Q5HYK3 327 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 MRPL2Q5T653 305 aaKnown RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 C8orf74Q6P047 294 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 EBLN2Q6P2I7 272 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 UNQ9165/PRO28630Q6UXU0 137 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 ATP5L2Q7Z4Y8 100 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 COMMD7Q86VX2 200 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 SLC35G3Q8N808 338 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 TMEM75Q8N9X5 138 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 OR11G2Q8NGC1 345 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 OR9I1Q8NGQ6 314 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 OR52N1Q8NH53 320 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 SLC37A2Q8TED4 501 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 RTN4IP1Q8WWV3 396 aaPredicted RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 APOBEC3DQ96AK3 386 aaPredicted RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 PPP1R14BQ96C90 147 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 KCTD7Q96MP8 289 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 HBEGFQ99075 208 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 SEC22CQ9BRL7 303 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 SHANK2-AS3Q9BTD1 123 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF717Q9BY31 904 aaPredicted RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 TXNIPQ9H3M7 391 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 MAP1LC3AQ9H492 121 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 METTL8Q9H825 291 aaKnown RBP1.51□□□□□ -2.17
PTPN4-205ENST00000433888 FAM60AQ9NP50 221 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 MTCH2Q9Y6C9 303 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms