RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SLC36A1Q7Z2H8 476 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 FOXC2Q99958 501 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 SLC25A21Q9BQT8 299 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-206ENST00000431390 ING3Q9NXR8 418 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 KAAG1Q9UBP8 84 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 KIF25Q9UIL4 384 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 AKAP6Q13023 2319 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 FUOMA2VDF0 154 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 FABP7O15540 132 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 IGHV2-70P01814 119 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 CTXN2P0C2S0 81 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 RCC1P18754 421 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-206ENST00000431390 ERP29P30040 261 aaKnown RBP15.17■□□□□ 0.02
HMGN1-206ENST00000431390 EFNA4P52798 201 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 RAG2P55895 527 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 TSPAN5P62079 268 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 SCGB2B2Q4G0G5 96 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 OR4A4PQ8NGN8 299 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 TMEM246Q9BRR3 403 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 C20orf85Q9H1P6 137 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 CHODLQ9H9P2 273 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 NUDT15Q9NV35 164 aa15.17■□□□□ 0.02
HMGN1-206ENST00000431390 TMPRSS2O15393 492 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 OR5H8P0DN80 308 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 TRAT1Q6PIZ9 186 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 ZNF554Q86TJ5 538 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 MUC20Q8N307 709 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-206ENST00000431390 FAM216BQ8N7L0 139 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 TMEM185AQ8NFB2 350 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 CCDC107Q8WV48 283 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 CCL19Q99731 98 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 GINS4Q9BRT9 223 aa15.16■□□□□ 0.02
HMGN1-206ENST00000431390 MEIKINA0A087WXM9 373 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 A0A1B0GW55 424 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 INMT-MINDY4F8WBC2 141 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 SDCBPO00560 298 aaPredicted RBP15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DIRAS3O95661 229 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 H2AFB2P0C5Z0 115 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4L2P0CJ85 424 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4L3P0CJ86 424 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4L4P0CJ87 422 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4L5P0CJ88 424 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4L6P0CJ89 424 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4L7P0CJ90 424 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 SELLP14151 372 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 GLIPR1P48060 266 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 P2RX3P56373 397 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 TMEM33P57088 247 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 HMGN3Q15651 99 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 C6orf183Q5T699 404 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4L9Q6RFH8 374 aaPredicted RBP15.15■□□□□ 0.02
HMGN1-206ENST00000431390 LHFPL1Q86WI0 220 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 OR13C8Q8NGS7 320 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 TERB2Q8NHR7 220 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 RAB1CQ92928 201 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 TIMD4Q96H15 378 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 CABLES2Q9BTV7 478 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 LIME1Q9H400 295 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 KCNIP1Q9NZI2 227 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DUX4Q9UBX2 424 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 ACANP16112 2415 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 TRAV6A0A075B6T7 132 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 ODAMA1E959 279 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 ADAM20O43506 726 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 LY6HO94772 140 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 SCTP09683 121 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 GLP1RP43220 463 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DHRS11Q6UWP2 260 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 OR6F1Q8NGZ6 308 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 NINJ1Q92982 152 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 GSX1Q9H4S2 264 aaPredicted RBP15.15■□□□□ 0.02
HMGN1-206ENST00000431390 PCDHB10Q9UN67 800 aa15.15■□□□□ 0.02
HMGN1-206ENST00000431390 DSCAML1Q8TD84 2053 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 CEACAM18A8MTB9 384 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 ECI1P42126 302 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 MECP2P51608 486 aaKnown RBP15.14■□□□□ 0.01
HMGN1-206ENST00000431390 CR1LQ2VPA4 569 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 TMEM155Q4W5P6 130 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 ZNF660Q6AZW8 331 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-206ENST00000431390 ZDHHC22Q8N966 263 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 OR6C3Q9NZP0 311 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 SLC25A10Q9UBX3 287 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-206ENST00000431390 OPN4Q9UHM6 478 aa15.14■□□□□ 0.01
HMGN1-206ENST00000431390 NIPBLQ6KC79 2804 aaeCLIP15.13■□□□□ 0.01
HMGN1-206ENST00000431390 TRAV39A0A0B4J263 110 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 ARPC1BO15143 372 aaKnown RBP15.13■□□□□ 0.01
HMGN1-206ENST00000431390 DHFRP00374 187 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 EDDM3BP56851 147 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 SEC61A1P61619 476 aaKnown RBP15.13■□□□□ 0.01
HMGN1-206ENST00000431390 HERPUD1Q15011 391 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 LRRC10Q5BKY1 277 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 IGSF11Q5DX21 431 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 LYPD2Q6UXB3 125 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 TPRX1Q8N7U7 411 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 GIMAP1Q8WWP7 306 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 MRGPRFQ96AM1 343 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 ZNF2Q9BSG1 426 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-206ENST00000431390 TAF9BQ9HBM6 251 aa15.13■□□□□ 0.01
HMGN1-206ENST00000431390 hCG_2014768A0A024R1R8 64 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms