RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 THBDP07204 575 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 SSTP61278 116 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 HLA-DRB3P79483 266 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 FGL1Q08830 312 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 SNTB1Q13884 538 aaKnown RBP14.05□□□□□ -0.16
USHBP1-203ENST00000431146 PCSK4Q6UW60 755 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF767PQ75MW2 155 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 PCNPQ8WW12 178 aaKnown RBP14.05□□□□□ -0.16
USHBP1-203ENST00000431146 PIK3IP1Q96FE7 263 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 OR2V2Q96R30 315 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 RSRP1Q9BUV0 290 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 MBD2Q9UBB5 411 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 TUBD1Q9UJT1 453 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 TRAPPC2LQ9UL33 140 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 COL6A6A6NMZ7 2263 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 DIRAS3O95661 229 aa14.04□□□□□ -0.16
USHBP1-203ENST00000431146 ACAA1P09110 424 aaPredicted RBP14.04□□□□□ -0.16
USHBP1-203ENST00000431146 EGR1P18146 543 aa14.04□□□□□ -0.16
USHBP1-203ENST00000431146 GNRHRP30968 328 aa14.04□□□□□ -0.16
USHBP1-203ENST00000431146 EXOSC2Q13868 293 aaKnown RBP14.04□□□□□ -0.16
USHBP1-203ENST00000431146 BEX5Q5H9J7 111 aa14.04□□□□□ -0.16
USHBP1-203ENST00000431146 ZC4H2Q9NQZ6 224 aa14.04□□□□□ -0.16
USHBP1-203ENST00000431146 GSKIPQ9P0R6 139 aa14.04□□□□□ -0.16
USHBP1-203ENST00000431146 OR1A1Q9P1Q5 309 aa14.04□□□□□ -0.16
USHBP1-203ENST00000431146 ABCD4O14678 606 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 MDH2P40926 338 aaKnown RBP14.03□□□□□ -0.16
USHBP1-203ENST00000431146 UCP3P55916 312 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF818PQ6ZRF7 136 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 LDLRAD3Q86YD5 345 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 OR8H3Q8N146 312 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 MRPL24Q96A35 216 aaKnown RBP14.03□□□□□ -0.16
USHBP1-203ENST00000431146 DMRTA2Q96SC8 542 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 NMES1Q9C002 83 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 IGLV3-9A0A075B6K5 115 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 MEX3AA1L020 520 aaKnown RBP14.03□□□□□ -0.16
USHBP1-203ENST00000431146 DPRXA6NFQ7 191 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 HSD17B6O14756 317 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 RPA2P15927 270 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 PSMB6P28072 239 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 KLRB1Q12918 225 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 TMEM187Q14656 261 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 TMEM108Q6UXF1 575 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 MOGAT3Q86VF5 341 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 KCNIP3Q9Y2W7 256 aa14.03□□□□□ -0.16
USHBP1-203ENST00000431146 LEUTXA8MZ59 168 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 PHF1O43189 567 aaPredicted RBP14.02□□□□□ -0.16
USHBP1-203ENST00000431146 TUSC2O75896 110 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 CD200P41217 278 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 BSPH1Q075Z2 132 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 AESQ08117 197 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 GAPTQ8N292 157 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 OR4A4PQ8NGN8 299 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 OR10J5Q8NHC4 309 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 THAP6Q8TBB0 222 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 ITLN1Q8WWA0 313 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 TP53RKQ96S44 253 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 VKORC1Q9BQB6 163 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 SLC5A7Q9GZV3 580 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 CCL28Q9NRJ3 127 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 TNFSF18Q9UNG2 199 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 MEMO1Q9Y316 297 aa14.02□□□□□ -0.16
USHBP1-203ENST00000431146 TPRP12270 2363 aaKnown RBP14.02□□□□□ -0.16
USHBP1-203ENST00000431146 IGHV3OR15-7A0A075B7D8 119 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 ZNF98A6NK75 572 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 SLC25A4P12235 298 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 COL10A1Q03692 680 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 SMIM21Q3B7S5 101 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 TPRX1Q8N7U7 411 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 ZNF565Q8N9K5 539 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 GLYATL2Q8WU03 294 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 MEGF10Q96KG7 1140 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 TREM2Q9NZC2 230 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 GLS2Q9UI32 602 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 PKDREJQ9NTG1 2253 aa14.02□□□□□ -0.17
USHBP1-203ENST00000431146 TRBV6-7A0A0A0MS04 114 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 RNF222A6NCQ9 220 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 H0YIZ8 118 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.01□□□□□ -0.17
USHBP1-203ENST00000431146 TNFSF12O43508 249 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 CTXN2P0C2S0 81 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 KCNJ3P48549 501 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 ARHGDIBP52566 201 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 RPS23P62266 143 aaKnown RBP14.01□□□□□ -0.17
USHBP1-203ENST00000431146 MZT1Q08AG7 82 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 Q3ZCU0 254 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 FAM209BQ5JX69 171 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 GGNBP1Q5YKI7 109 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 FOXRED2Q8IWF2 684 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 CD177Q8N6Q3 437 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 GALNT14Q96FL9 552 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 WFIKKN1Q96NZ8 548 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 PCDHB10Q9UN67 800 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 AUP1Q9Y679 476 aa14.01□□□□□ -0.17
USHBP1-203ENST00000431146 MPPED1O15442 326 aa14□□□□□ -0.17
USHBP1-203ENST00000431146 RP2O75695 350 aa14□□□□□ -0.17
USHBP1-203ENST00000431146 C4BPBP20851 252 aa14□□□□□ -0.17
USHBP1-203ENST00000431146 LMO1P25800 156 aa14□□□□□ -0.17
USHBP1-203ENST00000431146 ID4P47928 161 aa14□□□□□ -0.17
USHBP1-203ENST00000431146 CYCSP99999 105 aaKnown RBP14□□□□□ -0.17
USHBP1-203ENST00000431146 RAB32Q13637 225 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms