RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ZNF439Q8NDP4 499 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 TMEM104Q8NE00 496 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 ZNF555Q8NEP9 628 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 WFDC9Q8NEX5 89 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 FBLIM1Q8WUP2 373 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 CCDC107Q8WV48 283 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 STMN2Q93045 179 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 ST6GALNAC6Q969X2 333 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 DERL3Q96Q80 235 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 KCNK15Q9H427 330 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 NECAP2Q9NVZ3 263 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 BABAM2Q9NXR7 383 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 ING4Q9UNL4 249 aa9.31□□□□□ -0.92
HDAC4-202ENST00000430200 EXOSC1Q9Y3B2 195 aaKnown RBP9.31□□□□□ -0.92
HDAC4-202ENST00000430200 IGHV1-3A0A0C4DH29 117 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 TCRBV4S1A1TA0A5B7 111 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 TMEM30CPA0ZSE6 113 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 GPX5O75715 221 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 CD2P06729 351 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 PF4V1P10720 104 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 TMEM11P17152 192 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 C21orf33P30042 268 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-202ENST00000430200 PRRX1P54821 245 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 PPP3R1P63098 170 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 EMX1Q04741 257 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-202ENST00000430200 ZNF816Q0VGE8 651 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-202ENST00000430200 ST3GAL4Q11206 333 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 MADCAM1Q13477 382 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 GNMTQ14749 295 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 Q499Y3 187 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 KHDC1LQ5JSQ8 128 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 FAM27D1Q5T7N8 215 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 CENPVQ7Z7K6 275 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-202ENST00000430200 MRAPQ8TCY5 172 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 AKR1E2Q96JD6 320 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 METTL9Q9H1A3 318 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 BANF2Q9H503 90 aa9.3□□□□□ -0.92
HDAC4-202ENST00000430200 AMMECR1Q9Y4X0 333 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-202ENST00000430200 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-202ENST00000430200 WI2-2373I1.2A0A1W2PRP0 233 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 ANKRD65E5RJM6 399 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 EBAG9O00559 213 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 MAGEB3O15480 346 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 MT-ND4P03905 459 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 RCC1P18754 421 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-202ENST00000430200 MYL12AP19105 171 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 CD33P20138 364 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-202ENST00000430200 MNDAP41218 407 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 KCNJ3P48549 501 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 ZNF134P52741 427 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 MPV17LQ2QL34 196 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 ATAD3CQ5T2N8 411 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 CCDC144NLQ6NUI1 221 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 TMPRSS11AQ6ZMR5 421 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 C8orf86Q6ZUL3 223 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 AHSA2Q719I0 299 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 IZUMO1Q8IYV9 350 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 GAPTQ8N292 157 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 DTX3Q8N9I9 347 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 ZNF565Q8N9K5 539 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 OR4K15Q8NH41 348 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 OR1L1Q8NH94 360 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 HAVCR2Q8TDQ0 301 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 CREB3L1Q96BA8 519 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 CPNE2Q96FN4 548 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-202ENST00000430200 TMEM80Q96HE8 168 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 EAF1Q96JC9 268 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-202ENST00000430200 DUX3Q96PT4 197 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 BARHL1Q9BZE3 327 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 FKBP14Q9NWM8 211 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 PAK1IP1Q9NWT1 392 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-202ENST00000430200 GFOD1Q9NXC2 390 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 PSORS1C1Q9UIG5 152 aa9.29□□□□□ -0.92
HDAC4-202ENST00000430200 MRPS28Q9Y2Q9 187 aaKnown RBP9.29□□□□□ -0.92
HDAC4-202ENST00000430200 TENM3Q9P273 2699 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 PSMB11A5LHX3 300 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 AIPO00170 330 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 SDCBPO00560 298 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-202ENST00000430200 MAS1P04201 325 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 RAB7AP51149 207 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 ARHGDIBP52566 201 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 RPL23AP62750 156 aaKnown RBP9.28□□□□□ -0.92
HDAC4-202ENST00000430200 EBI3Q14213 229 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 HES1Q14469 280 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 YIF1BQ5BJH7 314 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 OGFRL1Q5TC84 451 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-202ENST00000430200 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 OR2W3Q7Z3T1 314 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 MRPL41Q8IXM3 137 aaKnown RBP9.28□□□□□ -0.92
HDAC4-202ENST00000430200 OR8H3Q8N146 312 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 JAGN1Q8N5M9 183 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 Q8N9W7 124 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 OR10A7Q8NGE5 316 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 OR4X2Q8NGF9 303 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 OR10V1Q8NGI7 309 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 OR10X1Q8NGY0 326 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 RTN4IP1Q8WWV3 396 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms