RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SP6Q3SY56 376 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 PHLDA2Q53GA4 152 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 COLCA1Q6ZS62 124 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 GGNQ86UU5 652 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 MKXQ8IYA7 352 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 OR2AE1Q8NHA4 323 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 SECTM1Q8WVN6 248 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 PIGCQ92535 297 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 HIST1H2BAQ96A08 127 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF837Q96EG3 531 aaPredicted RBP7.48□□□□□ -1.21
GABPB1-205ENST00000429662 BOD1Q96IK1 185 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 ADGRG7Q96K78 797 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 LIME1Q9H400 295 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 C11orf1Q9H5F2 150 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 TCFL5Q9UL49 500 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 UBE2J1Q9Y385 318 aaPredicted RBP7.48□□□□□ -1.21
GABPB1-205ENST00000429662 DCHS2Q6V1P9 2916 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 IGKV3D-15A0A087WSY6 115 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 TRBV6-6A0A0A6YYG2 114 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 C5orf52A6NGY3 159 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 CDRT15L2A8MXV6 281 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF732B4DXR9 585 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 K7N7A8 449 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 M0R036 132 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 UBE2CO00762 179 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 CXCL13O43927 109 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 DFFBO76075 338 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 IFNA17P01571 189 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 CELA2AP08217 269 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 MMP7P09237 267 aaPredicted RBP7.47□□□□□ -1.21
GABPB1-205ENST00000429662 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 SLC25A6P12236 298 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 B4GALT1P15291 398 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF44P15621 663 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 VDAC1P21796 283 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 FGF12P61328 243 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF92Q03936 586 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 HABP2Q14520 560 aaPredicted RBP7.47□□□□□ -1.21
GABPB1-205ENST00000429662 PIGYQ3MUY2 71 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 AWAT1Q58HT5 328 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 DTX1Q86Y01 620 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 C1QL4Q86Z23 238 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 CMTM1Q8IZ96 169 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 SLC35G3Q8N808 338 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 OR5L1Q8NGL2 311 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 OR10D3Q8NH80 312 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 AKR7LQ8NHP1 331 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 HPSE2Q8WWQ2 592 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 HIST1H2AAQ96QV6 131 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 CLCC1Q96S66 551 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 ZPBPQ9BS86 351 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 SCRT1Q9BWW7 348 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 ESRP2Q9H6T0 727 aaKnown RBP7.47□□□□□ -1.21
GABPB1-205ENST00000429662 AKIRIN1Q9H9L7 192 aaPredicted RBP7.47□□□□□ -1.21
GABPB1-205ENST00000429662 WFDC1Q9HC57 220 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 Q9N2K0 584 aa7.47□□□□□ -1.21
GABPB1-205ENST00000429662 LYRM2Q9NU23 88 aaPredicted RBP7.47□□□□□ -1.21
GABPB1-205ENST00000429662 METTL1Q9UBP6 276 aaKnown RBP7.47□□□□□ -1.21
GABPB1-205ENST00000429662 BOKQ9UMX3 212 aaPredicted RBP7.47□□□□□ -1.21
GABPB1-205ENST00000429662 C9JQL5 133 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 MASP2O00187 686 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 NME2P1O60361 137 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 OR7C1O76099 320 aaPredicted RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 MT-CO3P00414 261 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 SERPINA7P05543 415 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 SNRNP70P08621 437 aaKnown RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 RAB5AP20339 215 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 UCP1P25874 307 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 GNRHRP30968 328 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 HGFACQ04756 655 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 IL24Q13007 206 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 SSPNQ14714 243 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 IGFBP7Q16270 282 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 EIF2S3LQ2VIR3 472 aaKnown RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 DMRTC1Q5HYR2 192 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 SOHLH1Q5JUK2 328 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 YRDCQ86U90 279 aaKnown RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 TBC1D26Q86UD7 250 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 SELENOHQ8IZQ5 122 aaKnown RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF611Q8N823 705 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 SUMF2Q8NBJ7 301 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 OR5A2Q8NGI9 324 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 OR52M1Q8NGK5 317 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 OR5D13Q8NGL4 314 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 OR2G3Q8NGZ4 309 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 TCTEX1D2Q8WW35 142 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 EXTL1Q92935 676 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 APOBEC3DQ96AK3 386 aaPredicted RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 RBMXL1Q96E39 390 aaKnown RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 KIAA1456Q9P272 454 aa7.46□□□□□ -1.21
GABPB1-205ENST00000429662 PHF3Q92576 2039 aaKnown RBP7.46□□□□□ -1.21
GABPB1-205ENST00000429662 A0A087WWC5 75 aa7.46□□□□□ -1.22
GABPB1-205ENST00000429662 A0A1B0GU03 582 aa7.46□□□□□ -1.22
GABPB1-205ENST00000429662 NKX2-6A6NCS4 301 aa7.46□□□□□ -1.22
GABPB1-205ENST00000429662 CXorf65A6NEN9 183 aa7.46□□□□□ -1.22
GABPB1-205ENST00000429662 RBFOX3A6NFN3 312 aa7.46□□□□□ -1.22
GABPB1-205ENST00000429662 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
GABPB1-205ENST00000429662 H0Y980 276 aa7.46□□□□□ -1.22
GABPB1-205ENST00000429662 TRAPPC2LH3BP13 241 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms