RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TMEM215Q68D42 235 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 TMEM25Q86YD3 366 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR8I2Q8N0Y5 310 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 MRAP2Q96G30 205 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 FAM110AQ9BQ89 295 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 HCFC1R1Q9NWW0 138 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 B4GALT6Q9UBX8 382 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 LSM7Q9UK45 103 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 COL4A3Q01955 1670 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 A0A0A6YYD5 115 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 TMEM14DPA8MWL7 114 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 RBMXL2O75526 392 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 TIMP1P01033 207 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 VSIG8P0DPA2 414 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 CCL5P13501 91 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 HIST1H1DP16402 221 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 DNASE1L1P49184 302 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 SPINT3P49223 89 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 CSNK2A1P68400 391 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 FMODQ06828 376 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 SQSTM1Q13501 440 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 TSTA3Q13630 321 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 MPV17L2Q567V2 206 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 FAM78BQ5VT40 261 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 C1orf53Q5VUE5 145 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 STUMQ69YW2 141 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 WBP2NLQ6ICG8 309 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 LINC00114Q6XXX2 140 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 ERASQ7Z444 233 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 CSNK2A3Q8NEV1 391 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR4N2Q8NGD1 307 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR10P1Q8NGE3 313 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 DPF1Q92782 380 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 CNRIP1Q96F85 164 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 ABHD14BQ96IU4 210 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 PSMG3Q9BT73 122 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 GTSF1LQ9H1H1 148 aa7.66□□□□□ -1.18
CDC42BPA-206ENST00000429440 TRAV8-6A0A0B4J262 113 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 IGSF23A1L1A6 192 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 FAM24AA6NFZ4 105 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 TMEM202A6NGA9 273 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 NDUFS4O43181 175 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 BNIP3LO60238 219 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 S1PR2O95136 353 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 GYPAP02724 150 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 NPBWR2P48146 333 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 CYB561P49447 251 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 TMEM187Q14656 261 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 C1orf140Q5VVS0 124 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF776Q68DI1 518 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 FCRL6Q6DN72 434 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 ARHGEF39Q8N4T4 335 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 TMEM252Q8N6L7 170 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR5C1Q8NGR4 320 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 GMPPAQ96IJ6 420 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 C18orf12Q96KH6 178 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 LRRC61Q9BV99 259 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 HHLA2Q9UM44 414 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 LRRK1Q38SD2 2015 aa7.65□□□□□ -1.18
CDC42BPA-206ENST00000429440 RANBP2P49792 3224 aaKnown RBP7.65□□□□□ -1.19
CDC42BPA-206ENST00000429440 RAB29O14966 203 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 MPPED1O15442 326 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 NGFRP08138 427 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 JMJD7P0C870 316 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 C3orf79P0CE67 100 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 STAG3L2P0CL84 134 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 DRD1P21728 446 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 GUCA1AP43080 201 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 ASCL1P50553 236 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 CLDN2P57739 230 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 RHOBP62745 196 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 POU3F1Q03052 451 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 HSD52Q0P140 79 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 SLC18B1Q6NT16 456 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 OTOSQ8NHW6 89 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 SCAMP4Q969E2 229 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 SDF2Q99470 211 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 ELOVL3Q9HB03 270 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 RPRMQ9NS64 109 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 HCFC2Q9Y5Z7 792 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 CENPVL1A0A0U1RR11 272 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 A0A1B0GWA3 101 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 C1QTNF9BB2RNN3 333 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 TRANK1O15050 2925 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 HNRNPA1P09651 372 aaKnown RBP eCLIP7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 OPRM1P35372 400 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 ELAVL3Q14576 367 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 CD300EQ496F6 205 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 CCDC144NLQ6NUI1 221 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 MFSD12Q6NUT3 480 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 MRPL54Q6P161 138 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 FIGLAQ6QHK4 219 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 LIAT1Q6ZQX7 453 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 HSD11B1LQ7Z5J1 315 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 SLC22A24Q8N4F4 322 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 CRISPLD2Q9H0B8 497 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 PELI2Q9HAT8 420 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms