RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 DNAJB11Q9UBS4 358 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 TIMM10BQ9Y5J6 103 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 ATP23Q9Y6H3 246 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 CADP27708 2225 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 AHRRA9YTQ3 701 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 ZNF732B4DXR9 585 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 SYNGR4O95473 234 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 IFNA5P01569 189 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 H2AFB1P0C5Y9 115 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 TDGF1P13385 188 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 PSG4Q00888 419 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 CXorf66Q5JRM2 361 aaPredicted RBP6.98□□□□□ -1.29
HPS4-205ENST00000429411 DTX1Q86Y01 620 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 CPT1CQ8TCG5 803 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 RARRES2Q99969 163 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 PLEKHA2Q9HB19 425 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 NGBQ9NPG2 151 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 SLC7A10Q9NS82 523 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 IL36RNQ9UBH0 155 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 HS3ST3B1Q9Y662 390 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 USP24Q9UPU5 2620 aa6.98□□□□□ -1.29
HPS4-205ENST00000429411 TRBV23-1A0A0A0MS06 115 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 DEDDO75618 318 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SMIM6P0DI80 62 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 S100A7P31151 101 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 CYB561P49447 251 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SPCS3P61009 180 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 RAB11AP62491 216 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 TMEM267Q0VDI3 215 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 PMS2P11Q13670 270 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 KIAA0141Q14154 515 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 HES3Q5TGS1 186 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 ABHD17BQ5VST6 288 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 RTL6Q6ICC9 239 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SLC23A3Q6PIS1 610 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 C17orf82Q86X59 251 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 DNASE2BQ8WZ79 361 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 C1orf147Q96MC9 270 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 ABHD14AQ9BUJ0 271 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 LIPGQ9Y5X9 500 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 C3orf85A0A1B0GTC6 90 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 TUSC2O75896 110 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SCTP09683 121 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 PRF1P14222 555 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 FUT3P21217 361 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 PTAFRP25105 342 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 S100A2P29034 98 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 PTGDSP41222 190 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 RPL23AP62750 156 aaKnown RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 NAAAQ02083 359 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 RAB35Q15286 201 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 EXT1Q16394 746 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 OR8G2PQ6IF36 304 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 CALHM1Q8IU99 346 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 GAPTQ8N292 157 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 ADPRHL1Q8NDY3 354 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 FGFBP3Q8TAT2 258 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SPSB1Q96BD6 273 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 S100PBPQ96BU1 408 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SAT2Q96F10 170 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 PNRC2Q9NPJ4 139 aaKnown RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 RNF150Q9ULK6 438 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SPG11Q96JI7 2443 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SIRPB1O00241 398 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 PDCD6O75340 191 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 PPYP01298 95 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 BCL3P20749 454 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 MDKP21741 143 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 SULT1A2P50226 295 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 FGF8P55075 233 aaPredicted RBP6.97□□□□□ -1.29
HPS4-205ENST00000429411 ZNF154Q13106 437 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 RHEBQ15382 184 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 TESK1Q15569 626 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 LIAT1Q6ZQX7 453 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 TBC1D26Q86UD7 250 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SKA3Q8IX90 412 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 Q96M66 194 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 TP53RKQ96S44 253 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SPIN2AQ99865 258 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 SPIN2BQ9BPZ2 258 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 GSN-AS1Q9NRJ2 163 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 CCL28Q9NRJ3 127 aa6.97□□□□□ -1.29
HPS4-205ENST00000429411 CRYM-AS1A6NIL9 109 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 ZNF891A8MT65 544 aaPredicted RBP6.96□□□□□ -1.29
HPS4-205ENST00000429411 GPR137BO60478 399 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 FAM157CP0CG43 387 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 HLA-GP17693 338 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 TRA2AQ13595 282 aaKnown RBP eCLIP6.96□□□□□ -1.29
HPS4-205ENST00000429411 PCOLCEQ15113 449 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 NSUN5P2Q63ZY6 315 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 PET117Q6UWS5 81 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 HIST2H3AQ71DI3 136 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 HINT2Q9BX68 163 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 HES7Q9BYE0 225 aa6.96□□□□□ -1.29
HPS4-205ENST00000429411 ZNF816-ZNF321PA0A0X1KG74 233 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 FGF16O43320 207 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ZIC3O60481 467 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 GRPP07492 148 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 CD59P13987 128 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms