RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 HOGA1Q86XE5 327 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 RPS4Y2Q8TD47 263 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 FGGYQ96C11 551 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 KLRF1Q9NZS2 232 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 LOC107986453A0A1B0GWG9 222 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZNF207O43670 478 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 GLI4P10075 376 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 ECI1P42126 302 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 SMAGPQ0VAQ4 97 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 Q6ZVH6 145 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR4D5Q8NGN0 318 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 LIPHQ8WWY8 451 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 MOB1AQ9H8S9 216 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 CDH20Q9HBT6 801 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 R4GN57 208 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 SLC25A17O43808 307 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM225BP0DP42 221 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 MGAT2Q10469 447 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 FDX2Q6P4F2 183 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR2AE1Q8NHA4 323 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 NUDT22Q9BRQ3 303 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 CDC42EP3Q9UKI2 254 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 NCOR1O75376 2440 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 IGHV5-51A0A0C4DH38 117 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 UPK3AO75631 287 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 CCL7P80098 99 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 DMWDQ09019 674 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 ICAM4Q14773 271 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM95Q3KNT9 176 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 DCAF12Q5T6F0 453 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 SFTPA2Q8IWL1 248 aa12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-203ENST00000428982 IGHV2OR16-5A0A0B4J2B6 119 aa12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 RPS27P42677 84 aaKnown RBP12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 RND2P52198 227 aa12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 FUT7Q11130 342 aa12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM176BQ3YBM2 270 aaPredicted RBP12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 VN1R1Q9GZP7 353 aa12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 METTL7AQ9H8H3 244 aa12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 GPR132Q9UNW8 380 aa12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 SLC22A13Q9Y226 551 aa12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 PTPRZ1P23471 2315 aaPredicted RBP12.58□□□□□ -0.39
SYNGAP1-203ENST00000428982 KNTC1P50748 2209 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 GAGE12BA1L429 117 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 GRIFINA4D1Z8 144 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 SYNGR4O95473 234 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 HERV-K104P61576 105 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 IL13RA2Q14627 380 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 STPG1Q5TH74 334 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 H1FOOQ8IZA3 346 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR4F5Q8NH21 305 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR4F4Q96R69 305 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 TIMP4Q99727 224 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 FSCN3Q9NQT6 498 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 PTRH2Q9Y3E5 179 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 C22orf46C9J442 243 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 BCL2P10415 239 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 FOLR3P41439 243 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 RPS4XP62701 263 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 EXT1Q16394 746 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 SPIN3Q5JUX0 258 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 LINC01590Q5TEZ4 76 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR2I1PQ8NGU4 316 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 HOXB13Q92826 284 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 UNC13CQ8NB66 2214 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 FAM24AA6NFZ4 105 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 CST7O76096 145 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 SNU13P55769 128 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 ZNF90Q03938 601 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 PRR22Q8IZ63 422 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 MRPL24Q96A35 216 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 FAM131CQ96AQ9 280 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 RHBDD3Q9Y3P4 386 aa12.58□□□□□ -0.4
SYNGAP1-203ENST00000428982 CORTO00230 105 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 NKX2-1P43699 371 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 TMEM52Q8NDY8 209 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 LYPD6BQ8NI32 183 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 LHX4Q969G2 390 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 SDF2L1Q9HCN8 221 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 GPR84Q9NQS5 396 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 NXT1Q9UKK6 140 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 SLC45A2Q9UMX9 530 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 SLC5A6Q9Y289 635 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 NGFRP08138 427 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 CYC1P08574 325 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 FSTP19883 344 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 UEVLDQ8IX04 471 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR2C3Q8N628 320 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 FAM60AQ9NP50 221 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 AMMECR1LQ6DCA0 310 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 OGFOD3Q6PK18 319 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 TMEM256Q8N2U0 113 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR8G5Q8NG78 346 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 NICN1Q9BSH3 213 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms