RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 URGCP-MRPS24S4R325 110 aa7.15□□□□□ -1.27
CD44-208ENST00000428726 IFNA2P01563 188 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 OR13C7P0DN81 318 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 BMP5P22003 454 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 ECI1P42126 302 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 SWI5Q1ZZU3 235 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 PDZD11Q5EBL8 140 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 PLA2G2CQ5R387 149 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 LRP11Q86VZ4 500 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 STOML3Q8TAV4 291 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 SLC25A40Q8TBP6 338 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 ADAMTS17Q8TE56 1095 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 PHYHIPLQ96FC7 376 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 METRNQ9UJH8 293 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 PRELID3BQ9Y3B1 194 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TNCP24821 2201 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 CDRT15L2A8MXV6 281 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 SSSCA1O60232 199 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 PRH1P02810 166 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 IAPPP10997 89 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 DEFA4P12838 97 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 RAB13P51153 203 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 UBE2NP61088 152 aaKnown RBP7.14□□□□□ -1.27
CD44-208ENST00000428726 RUNX1Q01196 453 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 NRN1LQ496H8 165 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 FAM76BQ5HYJ3 339 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 ZNF818PQ6ZRF7 136 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 LHFPL2Q6ZUX7 228 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TGIF2LYQ8IUE0 185 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 ZDHHC23Q8IYP9 409 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 SLC35G3Q8N808 338 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 C9orf106Q8NAJ2 232 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 ARL11Q969Q4 196 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TMEM45BQ96B21 275 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 WDYHV1Q96HA8 205 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 SLC5A7Q9GZV3 580 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 PIGMQ9H3S5 423 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TAF9BQ9HBM6 251 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 PLA2G2EQ9NZK7 142 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 NSG2Q9Y328 171 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TRAV20A0A0B4J274 112 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 WRBO00258 174 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TUSC2O75896 110 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 SELLP14151 372 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 RPS2P15880 293 aaKnown RBP7.14□□□□□ -1.27
CD44-208ENST00000428726 IGHV1-2P23083 117 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 ZNF83P51522 516 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 RBM11P57052 281 aaKnown RBP7.14□□□□□ -1.27
CD44-208ENST00000428726 HERPUD1Q15011 391 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TMEM42Q69YG0 159 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 Q6ZRG5 221 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 C22orf34Q6ZV56 151 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 EIF4E3Q8N5X7 224 aaKnown RBP7.14□□□□□ -1.27
CD44-208ENST00000428726 ZNF610Q8N9Z0 462 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TAAR6Q96RI8 345 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 GPR87Q9BY21 358 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 BCO1Q9HAY6 547 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 CYTL1Q9NRR1 136 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 FBXL17Q9UF56 701 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 HSF4Q9ULV5 492 aa7.14□□□□□ -1.27
CD44-208ENST00000428726 TRBV6-7A0A0A0MS04 114 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 IGKV1-6A0A0C4DH72 117 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 RRP8O43159 456 aaKnown RBP7.13□□□□□ -1.27
CD44-208ENST00000428726 MBPP02686 304 aaPredicted RBP7.13□□□□□ -1.27
CD44-208ENST00000428726 FUT6P51993 359 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 TMEM33P57088 247 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 AESQ08117 197 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 PEA15Q15121 130 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 UTF1Q5T230 341 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 ASCL4Q6XD76 172 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 WDR86Q86TI4 376 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 MKXQ8IYA7 352 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 RNF141Q8WVD5 230 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 IGKV3D-15A0A087WSY6 115 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 ANKRD30BLA7E2S9 258 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 C21orf140B9A014 251 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 K7EPK0 472 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 PDCD6O75340 191 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 NXPH2O95156 264 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 S100A6P06703 90 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 FBP1P09467 338 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 FUT3P21217 361 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 RPL12P30050 165 aaKnown RBP7.13□□□□□ -1.27
CD44-208ENST00000428726 DHRS11Q6UWP2 260 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 FAM71E2Q8N5Q1 922 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 FAM24BQ8N5W8 94 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 SUMF2Q8NBJ7 301 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 GLYATL2Q8WU03 294 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 POM121L2Q96KW2 1035 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 FER1L6-AS2Q96M78 137 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 TECTBQ96PL2 329 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 GLS2Q9UI32 602 aa7.13□□□□□ -1.27
CD44-208ENST00000428726 ARHGAP32A7KAX9 2087 aa7.12□□□□□ -1.27
CD44-208ENST00000428726 ADAM20O43506 726 aa7.12□□□□□ -1.27
CD44-208ENST00000428726 PPYP01298 95 aa7.12□□□□□ -1.27
CD44-208ENST00000428726 EIF2S3P41091 472 aaKnown RBP7.12□□□□□ -1.27
CD44-208ENST00000428726 TNFSF10P50591 281 aa7.12□□□□□ -1.27
CD44-208ENST00000428726 NCMAPQ5T1S8 102 aa7.12□□□□□ -1.27
CD44-208ENST00000428726 FIP1L1Q6UN15 594 aaKnown RBP7.12□□□□□ -1.27
CD44-208ENST00000428726 SSX9Q7RTT3 188 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms