RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 PTX4Q96A99 478 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 KIRREL1Q96J84 757 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 CITED4Q96RK1 184 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 CITED1Q99966 193 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 FAM192AQ9GZU8 254 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 CHST6Q9GZX3 395 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 NDUFB11Q9NX14 153 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 HSF4Q9ULV5 492 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 NBEAL1Q6ZS30 2694 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 MEIKINA0A087WXM9 373 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 TRBV6-6A0A0A6YYG2 114 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 TRDV1A0A1B0GX56 115 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 FAM90A9PA6NNJ1 464 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 TMEM14DPA8MWL7 114 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 BUB1B-PAK6H3BSN5 160 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 H3BUX3 64 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 CCRL2O00421 344 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 SLC17A2O00624 439 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 GEMIN2O14893 280 aaKnown RBP7.38□□□□□ -1.23
SMC1A-203ENST00000428014 TXNL1O43396 289 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 PDCD6O75340 191 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-203ENST00000428014 CDRT1O95170 752 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 MT-ND4P03905 459 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 ARG1P05089 322 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 MGMTP16455 207 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 HTR2CP28335 458 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 GLP1RP43220 463 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 RAB7AP51149 207 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 SCAND1P57086 179 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 HTD2P86397 168 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 PIGYQ3MUY2 71 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 SLC22A6Q4U2R8 563 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 AWAT2Q6E213 333 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 TMEM91Q6ZNR0 172 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 Q6ZSV7 163 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 MOB1BQ7L9L4 216 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 TRAPPC6BQ86SZ2 158 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 JAGN1Q8N5M9 183 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 OR13C5Q8NGS8 318 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 EDARADDQ8WWZ3 215 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 MMP28Q9H239 520 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 LIN7BQ9HAP6 207 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 ABCB10Q9NRK6 738 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 CALYQ9NYX4 217 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 IDI2-AS1Q9NZ38 188 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 KIF25Q9UIL4 384 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 ING4Q9UNL4 249 aa7.38□□□□□ -1.23
SMC1A-203ENST00000428014 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 A6NDX4 124 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 C15orf65H3BRN8 121 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 J3QR06 171 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 ITGB1BP1O14713 200 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 PDCD5O14737 125 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 TIMM23O14925 209 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 MAS1P04201 325 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 SERPINA2P20848 420 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 MNDAP41218 407 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 RPS27AP62979 156 aaKnown RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 QRFPP83859 136 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 SRSF2Q01130 221 aaKnown RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 EMX1Q04741 257 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF816Q0VGE8 651 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 EBI3Q14213 229 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 ATXN7L3Q14CW9 347 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 ARL6IP1Q15041 203 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 KCTD21Q4G0X4 260 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 LIPKQ5VXJ0 399 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF782Q6ZMW2 699 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 CEACAM19Q7Z692 300 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 ZFP41Q8N8Y5 198 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 OR4C13Q8NGP0 309 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 MUL1Q969V5 352 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 URM1Q9BTM9 101 aaKnown RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 SOX21Q9Y651 276 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-203ENST00000428014 WNK1Q9H4A3 2382 aa7.37□□□□□ -1.23
SMC1A-203ENST00000428014 MAGEA13PA6NCF6 341 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 TOR1AO14656 332 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 SPINT2O43291 252 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 NAPSAO96009 420 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 LPLP06858 475 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 EFNB2P52799 333 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 LOXL3P58215 753 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 MADCAM1Q13477 382 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 SRSF7Q16629 238 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMC1A-203ENST00000428014 RAB12Q6IQ22 244 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 FAM71F2Q6NXP2 309 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 TPRA1Q86W33 373 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 TPRX1Q8N7U7 411 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 OR8H1Q8NGG4 311 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 OR13A1Q8NGR1 328 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 OR2T6Q8NHC8 308 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 PLPPR1Q8TBJ4 325 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 CFHR4Q92496 578 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 CNBD2Q96M20 576 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 TMED9Q9BVK6 235 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 TMEM59Q9BXS4 323 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms