RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 ZMAT4Q9H898 229 aa13.22□□□□□ -0.29
PSMD4-203ENST00000427779 ZNF580Q9UK33 172 aa13.22□□□□□ -0.29
PSMD4-203ENST00000427779 LCE6AA0A183 80 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 DAPL1A0PJW8 107 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 TXNL1O43396 289 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 IGF1P05019 195 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 GZMHP20718 246 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 ZSCAN26Q16670 478 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 C8orf31Q8N9H6 132 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 OR52M1Q8NGK5 317 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 RTN4IP1Q8WWV3 396 aaPredicted RBP13.21□□□□□ -0.29
PSMD4-203ENST00000427779 MYCBPQ99417 103 aaPredicted RBP13.21□□□□□ -0.29
PSMD4-203ENST00000427779 GPER1Q99527 375 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 CIB1Q99828 191 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 CHCHD6Q9BRQ6 235 aa13.21□□□□□ -0.29
PSMD4-203ENST00000427779 OR4C45A6NMZ5 311 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 MAGEB3O15480 346 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 ZNF616Q08AN1 781 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 ALKBH1Q13686 389 aaKnown RBP13.2□□□□□ -0.3
PSMD4-203ENST00000427779 RSU1Q15404 277 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 TMEM65Q6PI78 240 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 FAM71E2Q8N5Q1 922 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 TMEM104Q8NE00 496 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 MRPL48Q96GC5 212 aaKnown RBP13.2□□□□□ -0.3
PSMD4-203ENST00000427779 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 KCTD7Q96MP8 289 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 HSPB9Q9BQS6 159 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 DPCDQ9BVM2 203 aaPredicted RBP13.2□□□□□ -0.3
PSMD4-203ENST00000427779 GABARAPL3Q9BY60 117 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 RIBC2Q9H4K1 309 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 ISYNA1Q9NPH2 558 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 PLSCR3Q9NRY6 295 aa13.2□□□□□ -0.3
PSMD4-203ENST00000427779 TRAV39A0A0B4J263 110 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 SDCBPO00560 298 aaPredicted RBP13.19□□□□□ -0.3
PSMD4-203ENST00000427779 FASP25445 335 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 RUNX1Q01196 453 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 Q3ZCU0 254 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 PARP16Q8N5Y8 322 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 SUMF2Q8NBJ7 301 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 MYOZ3Q8TDC0 251 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 TNFAIP8L1Q8WVP5 186 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 ARL11Q969Q4 196 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 PELI1Q96FA3 418 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 VSIG4Q9Y279 399 aa13.19□□□□□ -0.3
PSMD4-203ENST00000427779 TMEM30CPA0ZSE6 113 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 J3QLW9 94 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 ZNF19P17023 458 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 RAB3AP20336 220 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 POLR2IP36954 125 aaKnown RBP13.18□□□□□ -0.3
PSMD4-203ENST00000427779 PIGYQ3MUY2 71 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 LPCAT4Q643R3 524 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 ACBD7Q8N6N7 88 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 TRUB1Q8WWH5 349 aaKnown RBP13.18□□□□□ -0.3
PSMD4-203ENST00000427779 ST6GALNAC6Q969X2 333 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 C4orf36Q96KX1 117 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 IMPAD1Q9NX62 359 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 GFOD1Q9NXC2 390 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 ZNF107Q9UII5 783 aaPredicted RBP13.18□□□□□ -0.3
PSMD4-203ENST00000427779 DHDHQ9UQ10 334 aa13.18□□□□□ -0.3
PSMD4-203ENST00000427779 DNAH1Q9P2D7 4330 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 TMEM212A6NML5 194 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 I3L521 148 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 J3QRE1 110 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 GABRPO00591 440 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 OVOL1O14753 267 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 ORC5O43913 435 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
PSMD4-203ENST00000427779 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 OVCH2Q7RTZ1 564 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 SATL1Q86VE3 508 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 ZNF491Q8N8L2 437 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 OR10K1Q8NGX5 313 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 TSEN15Q8WW01 171 aaKnown RBP13.17□□□□□ -0.3
PSMD4-203ENST00000427779 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 GNB4Q9HAV0 340 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 RAB9BQ9NP90 201 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 ST3GAL6Q9Y274 331 aa13.17□□□□□ -0.3
PSMD4-203ENST00000427779 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 ZNF736B4DX44 427 aaPredicted RBP13.16□□□□□ -0.3
PSMD4-203ENST00000427779 C15orf65H3BRN8 121 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 SAP30O75446 220 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 HTR3BO95264 441 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 FCGR1AP12314 374 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 F2RL1P55085 397 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 ASPHD1Q5U4P2 390 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 MEDAGQ5VYS4 303 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
PSMD4-203ENST00000427779 STARD9Q9P2P6 4700 aa13.15□□□□□ -0.3
PSMD4-203ENST00000427779 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
PSMD4-203ENST00000427779 IGHV3-43A0A0B4J1X8 118 aa13.15□□□□□ -0.3
PSMD4-203ENST00000427779 CSTBP04080 98 aaKnown RBP13.15□□□□□ -0.3
PSMD4-203ENST00000427779 IGHV3-43DP0DP04 118 aa13.15□□□□□ -0.3
PSMD4-203ENST00000427779 SLC2A2P11168 524 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-203ENST00000427779 GP9P14770 177 aa13.15□□□□□ -0.3
PSMD4-203ENST00000427779 SPNP16150 400 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms