RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 A0A1B0GV90 55 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 PNPP00491 289 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 NGFP01138 241 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 BGLAPP02818 100 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 RPS11P62280 158 aaKnown RBP eCLIP9.23□□□□□ -0.93
TCOF1-204ENST00000427724 BSPH1Q075Z2 132 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
TCOF1-204ENST00000427724 RPL7L1Q6DKI1 246 aaKnown RBP9.23□□□□□ -0.93
TCOF1-204ENST00000427724 RPUSD3Q6P087 351 aaKnown RBP9.23□□□□□ -0.93
TCOF1-204ENST00000427724 C20orf196Q8IYI0 205 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 FAM58AQ8N1B3 248 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 ITLN1Q8WWA0 313 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 FAM168AQ92567 244 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 GBF1Q92538 1859 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 CDRT15L2A8MXV6 281 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 TERTO14746 1132 aaKnown RBP9.23□□□□□ -0.93
TCOF1-204ENST00000427724 JTBO76095 146 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 RNF224P0DH78 156 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 TMEM128Q5BJH2 165 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 NSUN5P2Q63ZY6 315 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 UNQ9370/PRO34162Q6UXP9 181 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 LYG1Q8N1E2 194 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 OR4A16Q8NH70 328 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 FLVCR1-AS1Q8TAF5 88 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 GPX8Q8TED1 209 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 LY6G6EA0A0G2JKS1 128 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 PINLYPA6NC86 204 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 TCAPO15273 167 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 SYNGR3O43761 229 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 RAB5AP20339 215 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 LSM6P62312 80 aaKnown RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 C2orf68Q2NKX9 166 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 CYB5R2Q6BCY4 276 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 BRICD5Q6PL45 260 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 TMEM217Q8N7C4 229 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 VOPP1Q96AW1 172 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 WDYHV1Q96HA8 205 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ARHGAP5-AS1Q96IT6 56 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 OR2V2Q96R30 315 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 NRIP2Q9BQI9 281 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF275Q9NSD4 429 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 PIPOXQ9P0Z9 390 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 CBY1Q9Y3M2 126 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 U3KQA8 63 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 TRIOO75962 3097 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 IGKV1D-42A0A075B6H8 117 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF724A8MTY0 619 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ZIC3O60481 467 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 DXOO77932 396 aaKnown RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ASAH2BP0C7U1 165 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 BRS3P32247 399 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 MSMO1Q15800 293 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 TMEM104Q8NE00 496 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 NDUFS6O75380 124 aaKnown RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 MUC1P15941 1255 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 COL8A1P27658 744 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 DVL1P1P54792 670 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 TIMM23BQ5SRD1 257 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 OSR2Q8N2R0 312 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ST6GALNAC3Q8NDV1 305 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ASB13Q8WXK3 278 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 FAM131CQ96AQ9 280 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 PLXNA4Q9HCM2 1894 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 PQLC2LA1A4F0 135 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 RNF212BA8MTL3 300 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 RAB11AP62491 216 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 RPL23AP62750 156 aaKnown RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 RAB32Q13637 225 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF519Q8TB69 540 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 HEYLQ9NQ87 328 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-204ENST00000427724 TNFSF18Q9UNG2 199 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 MPC1Q9Y5U8 109 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 PLXND1Q9Y4D7 1925 aa9.22□□□□□ -0.93
TCOF1-204ENST00000427724 ANAPC1Q9H1A4 1944 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 J3QRE1 110 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 HSD17B6O14756 317 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 DHRS3O75911 302 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 HPNP05981 417 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 ACAA1P09110 424 aaPredicted RBP9.21□□□□□ -0.93
TCOF1-204ENST00000427724 OR5H8P0DN80 308 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 CEACAM3P40198 252 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 PSG4Q00888 419 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 RAB31Q13636 194 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 MOGAT2Q3SYC2 334 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF787Q6DD87 383 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 RBMXL3Q8N7X1 1067 aaKnown RBP9.21□□□□□ -0.93
TCOF1-204ENST00000427724 OR1K1Q8NGR3 316 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 DIRC2Q96SL1 478 aa9.21□□□□□ -0.93
TCOF1-204ENST00000427724 PIGBOS1A0A0B4J2F0 54 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 TRBV5-5A0A0J9YX44 114 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 ZFP92A6NM28 416 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 CD1AP06126 327 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 TMEM11P17152 192 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 THBS4P35443 961 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 Q0VFX4 171 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 KISS1Q15726 138 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 TMEM123Q8N131 208 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 SLC25A28Q96A46 364 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms