RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 WNT9BO14905 357 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 SCO1O75880 301 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 ACAA1P09110 424 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 ZNF83P51522 516 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 FAM169BQ8N8A8 192 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 USB1Q9BQ65 265 aaKnown RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 PLEKHA2Q9HB19 425 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 ZFP57Q9NU63 452 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 ASF1BQ9NVP2 202 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 TAAR3PQ9P1P4 343 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 ERRFI1Q9UJM3 462 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 SVILO95425 2214 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 NKX2-6A6NCS4 301 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 M0R1B8 84 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 FGF16O43320 207 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 FAM180AQ6UWF9 173 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 DNTTIP1Q9H147 329 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 UFSP2Q9NUQ7 469 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 TAS2R3Q9NYW6 316 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 FBXL17Q9UF56 701 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 GLS2Q9UI32 602 aa11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.52
APOBEC3D-202ENST00000427494 AKAP13Q12802 2813 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 KRBOX1C9JBD0 128 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 NPIPB11E5RHQ5 1161 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 ST8SIA3O43173 380 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 S100GP29377 79 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 TIMP3P35625 211 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 HOXA4Q00056 320 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 FOXC1Q12948 553 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 OR10V1Q8NGI7 309 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 FAM57AQ8TBR7 257 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 RNF141Q8WVD5 230 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 TLNRD1Q9H1K6 362 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 TAF9BQ9HBM6 251 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 NUP50Q9UKX7 468 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 CFAP47Q6ZTR5 3102 aa11.82□□□□□ -0.52
APOBEC3D-202ENST00000427494 PRR14LQ5THK1 2151 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 H0Y980 276 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 CDS2O95674 445 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 UCP1P25874 307 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 TMEM33P57088 247 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 KRTCAP3Q53RY4 240 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 TIMM23BQ5SRD1 257 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 WDR82Q6UXN9 313 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 ACP7Q6ZNF0 438 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 OR1S2Q8NGQ3 325 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 LILRB1Q8NHL6 650 aaPredicted RBP11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 UBALD1Q8TB05 177 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 SPIN2AQ99865 258 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 SPIN2BQ9BPZ2 258 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 SLX1AQ9BQ83 275 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 TMA7Q9Y2S6 64 aaKnown RBP11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 WIPI2Q9Y4P8 454 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 POMT1Q9Y6A1 747 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 MUC6Q6W4X9 2439 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 SPENQ96T58 3664 aaKnown RBP11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 HSPA12AO43301 675 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 ADAM20O43506 726 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 GPR137BO60478 399 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 PSPNO60542 156 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 BOLLQ8N9W6 283 aaKnown RBP11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 OR5D13Q8NGL4 314 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 SFXN3Q9BWM7 321 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 MBNL3Q9NUK0 354 aaKnown RBP11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 ZDHHC8Q9ULC8 765 aa11.81□□□□□ -0.52
APOBEC3D-202ENST00000427494 DUXBA0A1W2PPF3 345 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 TMEM30CPA0ZSE6 113 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 P2RY1P47900 373 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 TESK1Q15569 626 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 HMGN3Q15651 99 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 OR2Z1Q8NG97 314 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 OR51H1Q8NH63 302 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 BSCL2Q96G97 398 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 ABHD17AQ96GS6 310 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 PIGMQ9H3S5 423 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 HEATR1Q9H583 2144 aaKnown RBP11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 ARID1AO14497 2285 aa11.8□□□□□ -0.52
APOBEC3D-202ENST00000427494 TFF1P04155 84 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 GAPDHP04406 335 aaKnown RBP11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 F2RP25116 425 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 LMO1P25800 156 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 NKX2-1P43699 371 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 MZT1Q08AG7 82 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 GNMTQ14749 295 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 EIF5AL1Q6IS14 154 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms