RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 OR2F2O95006 317 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 RLN2P04090 185 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 CD3EP07766 207 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 CD55P08174 381 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SCTP09683 121 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 PI3P19957 117 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 PSMB6P28072 239 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 S100A11P31949 105 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 PRDX2P32119 198 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SERPINF1P36955 418 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 LUMP51884 338 aaPredicted RBP7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SUPT4H1P63272 117 aaKnown RBP7.97□□□□□ -1.13
HMGB4-201ENST00000425537 IFITM2Q01629 132 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 BSPH1Q075Z2 132 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 OR2F1Q13607 317 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SMCO1Q147U7 214 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 TESK1Q15569 626 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 C2orf68Q2NKX9 166 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 IGSF11Q5DX21 431 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 DCAF12L2Q5VW00 463 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 C11orf87Q6NUJ2 197 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 ZNF826PQ6ZT77 177 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 ZNF546Q86UE3 836 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 C1orf87Q8N0U7 546 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 LRTM2Q8N967 370 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 OR11H4Q8NGC9 324 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 LILRB4Q8NHJ6 448 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 Q8TCH9 128 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 GALMQ96C23 342 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 AKR1E2Q96JD6 320 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SNX22Q96L94 193 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 LURAP1Q96LR2 239 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SPIN2AQ99865 258 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SPIN2BQ9BPZ2 258 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 MRPL37Q9BZE1 423 aaKnown RBP7.97□□□□□ -1.13
HMGB4-201ENST00000425537 MFFQ9GZY8 342 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 NCOR1P1Q9H4R4 102 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 KCNJ16Q9NPI9 418 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SLC2A9Q9NRM0 540 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 PLSCR3Q9NRY6 295 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 ZGRF1Q86YA3 2104 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 BSNQ9UPA5 3926 aa7.97□□□□□ -1.13
HMGB4-201ENST00000425537 SPENQ96T58 3664 aaKnown RBP7.96□□□□□ -1.13
HMGB4-201ENST00000425537 C3orf85A0A1B0GTC6 90 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 DPRXA6NFQ7 191 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 MPPED1O15442 326 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 ARPC5O15511 151 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 SPINT2O43291 252 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 TSC22D2O75157 780 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 RP2O75695 350 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 THBDP07204 575 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 RPS2P15880 293 aaKnown RBP7.96□□□□□ -1.14
HMGB4-201ENST00000425537 GZMHP20718 246 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 IL2RGP31785 369 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 RAB14P61106 215 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 COL10A1Q03692 680 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF345Q14585 488 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 OPCMLQ14982 345 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 ATXN7L3Q14CW9 347 aaPredicted RBP7.96□□□□□ -1.14
HMGB4-201ENST00000425537 HMGN3Q15651 99 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 MSMO1Q15800 293 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 LGALSLQ3ZCW2 172 aaPredicted RBP7.96□□□□□ -1.14
HMGB4-201ENST00000425537 BEX5Q5H9J7 111 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 NCMAPQ5T1S8 102 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 LIAT1Q6ZQX7 453 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 MOGAT3Q86VF5 341 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 LRP11Q86VZ4 500 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 H1FOOQ8IZA3 346 aaPredicted RBP7.96□□□□□ -1.14
HMGB4-201ENST00000425537 ZBTB34Q8NCN2 500 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 OR8H1Q8NGG4 311 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 OR10V1Q8NGI7 309 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 PLPPR1Q8TBJ4 325 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 CA5BP1Q8WTZ4 195 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 PPP1R1CQ8WVI7 109 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 SECTM1Q8WVN6 248 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 ITLN1Q8WWA0 313 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 WFIKKN1Q96NZ8 548 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 MS4A5Q9H3V2 200 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 ERRFI1Q9UJM3 462 aaPredicted RBP7.96□□□□□ -1.14
HMGB4-201ENST00000425537 UBE2J1Q9Y385 318 aaPredicted RBP7.96□□□□□ -1.14
HMGB4-201ENST00000425537 TMED3Q9Y3Q3 217 aa7.96□□□□□ -1.14
HMGB4-201ENST00000425537 RBM7Q9Y580 266 aaKnown RBP7.96□□□□□ -1.14
HMGB4-201ENST00000425537 IGHV3-64DA0A0J9YX35 117 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 NKX6-3A6NJ46 265 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 C17orf100A8MU93 164 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 G3V3Q6 166 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 CCSO14618 274 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 WNT9BO14905 357 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 PHF1O43189 567 aaPredicted RBP7.95□□□□□ -1.14
HMGB4-201ENST00000425537 MPC2O95563 127 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 IGHV1-46P01743 117 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 WNT2P09544 360 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 OR4A8P0C604 315 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 MUC1P15941 1255 aaPredicted RBP7.95□□□□□ -1.14
HMGB4-201ENST00000425537 RCC1P18754 421 aaPredicted RBP7.95□□□□□ -1.14
HMGB4-201ENST00000425537 APOBEC3AP31941 199 aaPredicted RBP7.95□□□□□ -1.14
HMGB4-201ENST00000425537 GABRA2P47869 451 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 SNRPD2P62316 118 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms