RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FIP1L1Q6UN15 594 aaKnown RBP13.11□□□□□ -0.31
SHOX2-202ENST00000425436 OR5M8Q8NGP6 311 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 COQ8AQ8NI60 647 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 MEGF10Q96KG7 1140 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
SHOX2-202ENST00000425436 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 CELSR1Q9NYQ6 3014 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 KIR2DS1A0A191URI9 304 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 SDCBPO00560 298 aaPredicted RBP13.1□□□□□ -0.31
SHOX2-202ENST00000425436 SYNGR1O43759 233 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 SFT2D2O95562 160 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 PRKACAP17612 351 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 VAMP1P23763 118 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 GLP1RP43220 463 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 KIR2DS4P43632 304 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 CYCSP99999 105 aaKnown RBP13.1□□□□□ -0.31
SHOX2-202ENST00000425436 IKZF1Q13422 519 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 KIR2DS1Q14954 304 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 PRAMEF6Q5VXH4 476 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 ZNF767PQ75MW2 155 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 OR11H4Q8NGC9 324 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 RDH5Q92781 318 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 ZNF2Q9BSG1 426 aaPredicted RBP13.1□□□□□ -0.31
SHOX2-202ENST00000425436 C5orf66Q9H5L9 145 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 PLSCR3Q9NRY6 295 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 GLS2Q9UI32 602 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 CREBBPQ92793 2442 aa13.1□□□□□ -0.31
SHOX2-202ENST00000425436 TRBV6-6A0A0A6YYG2 114 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 IGHV1-69-2A0A0G2JMI3 117 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 NOS1APO75052 506 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-202ENST00000425436 CTSDP07339 412 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-202ENST00000425436 GRPP07492 148 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 PGAM2P15259 253 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 NFYAP23511 347 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-202ENST00000425436 MDH2P40926 338 aaKnown RBP13.09□□□□□ -0.31
SHOX2-202ENST00000425436 UCP3P55916 312 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 H2BFSP57053 126 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 SHEQ5VZ18 495 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 ADAD2Q8NCV1 583 aaKnown RBP13.09□□□□□ -0.31
SHOX2-202ENST00000425436 MAFIPQ8WZ33 124 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 CCL17Q92583 94 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 Q96MF0 132 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 RTBDNQ9BSG5 229 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-202ENST00000425436 HDHD3Q9BSH5 251 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-202ENST00000425436 FN3KRPQ9HA64 309 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 UFSP2Q9NUQ7 469 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 DCAF16Q9NXF7 216 aa13.09□□□□□ -0.31
SHOX2-202ENST00000425436 OR5H14A6NHG9 310 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 DEGS1O15121 323 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 NAPSAO96009 420 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 TNFRSF1AP19438 455 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 ERVK11-1P61568 191 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 SEC61A1P61619 476 aaKnown RBP13.08□□□□□ -0.31
SHOX2-202ENST00000425436 TESK1Q15569 626 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 SPIN3Q5JUX0 258 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 ZNF660Q6AZW8 331 aaPredicted RBP13.08□□□□□ -0.31
SHOX2-202ENST00000425436 CLEC2AQ6UVW9 174 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 PRSS57Q6UWY2 283 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 C17orf107Q6ZR85 190 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 WDR86Q86TI4 376 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 MOGAT3Q86VF5 341 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 SCCPDHQ8NBX0 429 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 FAM168AQ92567 244 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 GCM1Q9NP62 436 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 COMMD9Q9P000 198 aa13.08□□□□□ -0.31
SHOX2-202ENST00000425436 ZNF469Q96JG9 3925 aaPredicted RBP13.08□□□□□ -0.32
SHOX2-202ENST00000425436 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 IGKV1D-8A0A087WSZ0 117 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 MAST4O15021 2626 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 PGA5P0DJD9 388 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 CD200P41217 278 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 PDLIM4P50479 330 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 HFEQ30201 348 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 LGALSLQ3ZCW2 172 aaPredicted RBP13.08□□□□□ -0.32
SHOX2-202ENST00000425436 Q5BKY6 102 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 SGPP2Q8IWX5 399 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 NRIP2Q9BQI9 281 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 PDCD10Q9BUL8 212 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 Q9N2K0 584 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 RAB18Q9NP72 206 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 KCNIP3Q9Y2W7 256 aa13.08□□□□□ -0.32
SHOX2-202ENST00000425436 RFPL4AA6NLU0 287 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 RFPL4AL1F8VTS6 287 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 F8VVB4 439 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 F8VWA3 439 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 G3V3Q6 166 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 SH2D1BO14796 132 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 RP2O75695 350 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 HOXA4Q00056 320 aaPredicted RBP13.07□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF154Q13106 437 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF146Q15072 292 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 C2orf68Q2NKX9 166 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 BRICD5Q6PL45 260 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF826PQ6ZT77 177 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 SUMF2Q8NBJ7 301 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 NEK7Q8TDX7 302 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms