RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 MPPED1O15442 326 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 CEACAM4O75871 244 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 SLC34A2O95436 690 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 TSPAN15O95858 294 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 TK1P04183 234 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 S100A9P06702 114 aaKnown RBP9.13□□□□□ -0.95
CUX1-205ENST00000425244 GPX4P36969 197 aaPredicted RBP9.13□□□□□ -0.95
CUX1-205ENST00000425244 PPT1P50897 306 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 RAB1AP62820 205 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 BTNL8Q6UX41 500 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 DPPA2Q7Z7J5 298 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 MCEMP1Q8IX19 187 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 TAAR6Q96RI8 345 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 SH3BGRL3Q9H299 93 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 PARP11Q9NR21 331 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 FAM212BQ9NTI7 297 aaPredicted RBP9.13□□□□□ -0.95
CUX1-205ENST00000425244 TRAPPC2LH3BP13 241 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 MKRN2OSH3BPM6 223 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 RPL36A-HNRNPH2H7BZ11 118 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 HSD17B6O14756 317 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 GPR137BO60478 399 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 NXPH3O95157 252 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 OMGP23515 440 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 AKR1C3P42330 323 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 CLINT1Q14677 625 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 GNMTQ14749 295 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 MIDNQ504T8 468 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 C10orf91Q5T1B1 145 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 COLCA1Q6ZS62 124 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 AKR1E2Q96JD6 320 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 HIST1H2AAQ96QV6 131 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 RSRP1Q9BUV0 290 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 MAGT1Q9H0U3 335 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 ZDHHC8Q9ULC8 765 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 C1QTNF9BB2RNN3 333 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 TNFSF12O43508 249 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 SYNGR1O43759 233 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 FBP1P09467 338 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 FAM87AP0C7U9 286 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 C1QTNF9P0C862 333 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 RAC2P15153 192 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 GNRHRP30968 328 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 CAMLGP49069 296 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 IGFBP7Q16270 282 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 ZNF695Q8IW36 515 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 GAPTQ8N292 157 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 UBAC2Q8NBM4 344 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 APOBEC3DQ96AK3 386 aaPredicted RBP9.12□□□□□ -0.95
CUX1-205ENST00000425244 KIRREL1Q96J84 757 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 MTCH1Q9NZJ7 389 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 TP53TG5Q9Y2B4 290 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 GTF3C1Q12789 2109 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 ZNF729A6NN14 1252 aaPredicted RBP9.12□□□□□ -0.95
CUX1-205ENST00000425244 HS3ST1O14792 307 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 S100A8P05109 93 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 UCP3P55916 312 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 PLP2Q04941 152 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 HIKESHIQ53FT3 197 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 SPATA46Q5T0L3 261 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 NUFIP2Q7Z417 695 aaKnown RBP9.12□□□□□ -0.95
CUX1-205ENST00000425244 ZDHHC11Q9H8X9 412 aa9.12□□□□□ -0.95
CUX1-205ENST00000425244 A0A1B0GV90 55 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 LILRA1O75019 489 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 FGF12P61328 243 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 CEACAM21Q3KPI0 293 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 NRN1LQ496H8 165 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 ETV3LQ6ZN32 361 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 ZNF818PQ6ZRF7 136 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 MKXQ8IYA7 352 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 GCNT2Q8N0V5 402 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 RDH5Q92781 318 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 LINC00470Q9BZP3 86 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 Q9N2K0 584 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 CBY1Q9Y3M2 126 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 TMED3Q9Y3Q3 217 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 IGKV1D-13A0A0B4J2D9 117 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 FAM24AA6NFZ4 105 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 CD300LBA8K4G0 201 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 K7ENP7 123 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 GPR37O15354 613 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 SSSCA1O60232 199 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 IGKV1-13P0DP09 117 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 P2RY1P47900 373 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 DVL1P1P54792 670 aaPredicted RBP9.11□□□□□ -0.95
CUX1-205ENST00000425244 EIF2S3LQ2VIR3 472 aaKnown RBP9.11□□□□□ -0.95
CUX1-205ENST00000425244 GPR157Q5UAW9 335 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 DHRS7BQ6IAN0 325 aaPredicted RBP9.11□□□□□ -0.95
CUX1-205ENST00000425244 INO80CQ6PI98 192 aaPredicted RBP9.11□□□□□ -0.95
CUX1-205ENST00000425244 C17orf78Q8N4C9 275 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 RBMXL3Q8N7X1 1067 aaKnown RBP9.11□□□□□ -0.95
CUX1-205ENST00000425244 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 EIF5A2Q9GZV4 153 aaKnown RBP9.11□□□□□ -0.95
CUX1-205ENST00000425244 TMEM222Q9H0R3 208 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 ZFP57Q9NU63 452 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 PRSS50Q9UI38 385 aa9.11□□□□□ -0.95
CUX1-205ENST00000425244 ADAM20O43506 726 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 CD5P06127 495 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 IL13RA2Q14627 380 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms