RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TMEM238LA0A1B0GVL6 79 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 CCL25O15444 150 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 DMDP11532 3685 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 TMEM11P17152 192 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF41P51814 821 aaPredicted RBP9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 TMEM241Q24JQ0 296 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 NUP54Q7Z3B4 507 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 D2HGDHQ8N465 521 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 GBGT1Q8N5D6 347 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 FAM122AQ96E09 287 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 LYZL4Q96KX0 146 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 KCNK17Q96T54 332 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 PIGLQ9Y2B2 252 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 SELENOKQ9Y6D0 94 aa9.75□□□□□ -0.85
SEC61A1-202ENST00000424880 ZFHX4Q86UP3 3567 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 BRWD1Q9NSI6 2320 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 C3orf85A0A1B0GTC6 90 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 PLRG1O43660 514 aaKnown RBP9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 IL33O95760 270 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 CHRNB4P30926 498 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 CARD18P57730 90 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 SELENOTP62341 195 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 PRDX4Q13162 271 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 FAM78BQ5VT40 261 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 FAM89BQ8N5H3 189 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 PGAM5Q96HS1 289 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 C20orf144Q9BQM9 153 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 RNF150Q9ULK6 438 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 FAM186AA6NE01 2351 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 TRIOBPQ9H2D6 2365 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 A0A1W2PNR3 127 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 SLC6A8P48029 635 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 CNN1P51911 297 aaKnown RBP9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 PTTG1IPP53801 180 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 MTCP1P56278 107 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 PLCXD2Q0VAA5 305 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 RBMXL1Q96E39 390 aaKnown RBP9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 Q9N2K0 584 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 LYRM2Q9NU23 88 aaPredicted RBP9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 NECAP2Q9NVZ3 263 aa9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 ERRFI1Q9UJM3 462 aaPredicted RBP9.74□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF320A2RRD8 509 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 CBY3A6NI87 242 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 SERPINE3A8MV23 424 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 F2Z2F3 143 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 PITX3O75364 302 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 NXPH2O95156 264 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 RPL23P62829 140 aaKnown RBP9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 Q6ZPA2 131 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 TGIF2LYQ8IUE0 185 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 STPG4Q8N801 248 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 SLC37A2Q8TED4 501 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF845Q96IR2 970 aaPredicted RBP9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 MIEN1Q9BRT3 115 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 CTDSP1Q9GZU7 261 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF286AQ9HBT8 521 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 OBP2AQ9NY56 170 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 B3GAT1Q9P2W7 334 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 C1QTNF9BB2RNN3 333 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF737O75373 536 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 IFI6P09912 130 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 COL8A2P25067 703 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 OR10J1P30954 320 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 NUFIP2Q7Z417 695 aaKnown RBP9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 OOSP2Q86WS3 158 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ST6GALNAC3Q8NDV1 305 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ATP5SQ99766 215 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 CLEC1BQ9P126 229 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 A0A0J9YY10 115 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF816-ZNF321PA0A0X1KG74 233 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 NKX6-3A6NJ46 265 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 M0QZ24 198 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 UMODP07911 640 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 CLRN1P58418 232 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 LEMD1Q68G75 181 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 Q6ZWC4 215 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 TBC1D26Q86UD7 250 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF709Q8N972 641 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 TMEM170AQ8WVE7 144 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 RASL10BQ96S79 203 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 TMEM204Q9BSN7 226 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 SLC25A22Q9H936 323 aa9.73□□□□□ -0.85
SEC61A1-202ENST00000424880 ADAMTS9Q9P2N4 1935 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 NPIPB7O75200 414 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 MT-ATP6P00846 226 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 EFNA3P52797 238 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 RAB30Q15771 203 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 ATOH7Q8N100 152 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 OR4F5Q8NH21 305 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 MRGPRDQ8TDS7 321 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 OR4F4Q96R69 305 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 TRAPPC1Q9Y5R8 145 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 A0A0G2JRQ6 117 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 FOXI3A8MTJ6 420 aaPredicted RBP9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 ZNF814B7Z6K7 855 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 CRYAAP02489 173 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms