RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PAX1P15863 534 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 GNMTQ14749 295 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 HERPUD1Q15011 391 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 KCNJ8Q15842 424 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 OR56B4Q8NH76 319 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 Q9N2K0 584 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 OR1A1Q9P1Q5 309 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 KAAG1Q9UBP8 84 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 MIOXQ9UGB7 285 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 MAST4O15021 2626 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 A0A1W2PPE3 182 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 ESCO2Q56NI9 601 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRPF39-202ENST00000424478 MCUBQ9NWR8 336 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 PNLIPRP3Q17RR3 467 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 PRAMEF5Q5TYX0 476 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 GDPD1Q8N9F7 314 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 ARL11Q969Q4 196 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 NUDT16L1Q9BRJ7 211 aaKnown RBP11.08□□□□□ -0.64
PRPF39-202ENST00000424478 MTORP42345 2549 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 UPK1BO75841 260 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 NFYAP23511 347 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-202ENST00000424478 NFYBP25208 207 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 INPP1P49441 399 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 ARF6P62330 175 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 OR52L2PQ8NGH6 319 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 ONECUT1Q9UBC0 465 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 TBC1D24Q9ULP9 559 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 PLA2G10O15496 165 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 NDUFA2O43678 99 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 RANBP1P43487 201 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 SLC35E4Q6ICL7 350 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 TOMM5Q8N4H5 51 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 PPP1R35Q8TAP8 253 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 SLC23A1Q9UHI7 598 aa11.08□□□□□ -0.64
PRPF39-202ENST00000424478 KIAA1324LA8MWY0 1029 aaPredicted RBP11.07□□□□□ -0.64
PRPF39-202ENST00000424478 CTDSPLO15194 276 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 HBZP02008 142 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 USF1P22415 310 aaPredicted RBP11.07□□□□□ -0.64
PRPF39-202ENST00000424478 OR5D13Q8NGL4 314 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 OR4C16Q8NGL9 310 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 OCSTAMPQ9BR26 566 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 RPUSD1Q9UJJ7 312 aaKnown RBP11.07□□□□□ -0.64
PRPF39-202ENST00000424478 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
PRPF39-202ENST00000424478 CUBNO60494 3623 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 A0A096LNT2 108 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 A0A1W2PRD5 423 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 A0A1W2PRF3 423 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 A0A1W2PRM7 423 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 CCR6P51684 374 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 ARPC4P59998 168 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 LINC00299Q6ZSB3 139 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 HOGA1Q86XE5 327 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 MBD6Q96DN6 1003 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 REG4Q9BYZ8 158 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 DNTTIP1Q9H147 329 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 SIRT7Q9NRC8 400 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 ANXA10Q9UJ72 324 aa11.07□□□□□ -0.64
PRPF39-202ENST00000424478 PPIAL4CA0A0B4J2A2 164 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 ZNF736B4DX44 427 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-202ENST00000424478 F5H0A9 414 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-202ENST00000424478 GSTZ1O43708 216 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-202ENST00000424478 PPIAL4GP0DN37 164 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 PAX6P26367 422 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 KLF9Q13886 244 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-202ENST00000424478 C17orf58Q2M2W7 97 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 CHRFAM7AQ494W8 412 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 GPHA2Q96T91 129 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 FAM234AQ9H0X4 552 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 EHFQ9NZC4 300 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 LOC105371242A0A075B767 164 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 FABP7O15540 132 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 PPP1CCP36873 323 aaKnown RBP11.06□□□□□ -0.64
PRPF39-202ENST00000424478 SCGB2B2Q4G0G5 96 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 TEP1Q99973 2627 aaKnown RBP11.06□□□□□ -0.64
PRPF39-202ENST00000424478 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-202ENST00000424478 CALYQ9NYX4 217 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 EDARQ9UNE0 448 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 TRGV10A0A0A0MS01 117 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 ANKRD20A5PA0PJZ0 165 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 H7C1Q1 480 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 NDUFS8O00217 210 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 STEAP1BQ6NZ63 245 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 GAPTQ8N292 157 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 ZNF565Q8N9K5 539 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 NINJ1Q92982 152 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 COX4I2Q96KJ9 171 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 SLC6A7Q99884 636 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 SCPEP1Q9HB40 452 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 ZNF286AQ9HBT8 521 aa11.06□□□□□ -0.64
PRPF39-202ENST00000424478 C15orf65H3BRN8 121 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 GNG10P50151 68 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 HLA-DRB3P79483 266 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 SHEQ5VZ18 495 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 LRRC75A-AS1Q8N1F1 130 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 BORCS5Q969J3 196 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 HRASLSQ9HDD0 168 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 MBNL3Q9NUK0 354 aaKnown RBP11.05□□□□□ -0.64
PRPF39-202ENST00000424478 IGHV3OR16-10A0A075B7F0 116 aa11.05□□□□□ -0.64
PRPF39-202ENST00000424478 TRDCB7Z8K6 153 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1769.6 ms