RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ARR3P36575 388 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 NPBWR1P48145 328 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 ERVFRD-1P60508 538 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 EIF3IQ13347 325 aaKnown RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 ZNF345Q14585 488 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 GNMTQ14749 295 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 KLF14Q8TD94 323 aaPredicted RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 RGCCQ9H4X1 137 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 RNF122Q9H9V4 155 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 NSG2Q9Y328 171 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 FBXO7Q9Y3I1 522 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 PLXNB1O43157 2135 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 TNCP24821 2201 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 LOC105371267A0A1B0GV96 52 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 A0A1W2PPE3 182 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 HMGB3O15347 200 aaKnown RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 SMPD2O60906 423 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 TMEM50AO95807 157 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 FBP1P09467 338 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 FAM157CP0CG43 387 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 SELLP14151 372 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 KIR2DL2P43627 348 aaPredicted RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 GNG3P63215 75 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 FAM189A2Q15884 450 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 Q6ZR03 302 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 TGIF2LYQ8IUE0 185 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 MRPL30Q8TCC3 161 aaKnown RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 MRGPRDQ8TDS7 321 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 MOB3AQ96BX8 217 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 AKR1E2Q96JD6 320 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 SHARPINQ9H0F6 387 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 HSF4Q9ULV5 492 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 ZFHX3Q15911 3703 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 TXNL1O43396 289 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 TIMM8AO60220 97 aaPredicted RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 UCP2P55851 309 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 ZNF816Q0VGE8 651 aaPredicted RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 OR8G1Q15617 311 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 MST1LQ2TV78 715 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 UTF1Q5T230 341 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 OR52L2PQ8NGH6 319 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 OR1L1Q8NH94 360 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 C10orf35Q96D05 121 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 NUDT16L1Q9BRJ7 211 aaKnown RBP10.12□□□□□ -0.79
PTPRN-204ENST00000423636 DNAJB11Q9UBS4 358 aa10.12□□□□□ -0.79
PTPRN-204ENST00000423636 CEACAM6P40199 344 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 GABRA2P47869 451 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 Q6ZRM9 215 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 OR10J5Q8NHC4 309 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 FAM213BQ8TBF2 198 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 C2CD4CQ8TF44 421 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 NUP50Q9UKX7 468 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 WNK2Q9Y3S1 2297 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 TSPAN9O75954 239 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 BMP5P22003 454 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 HOXC12P31275 282 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 SSTR5P35346 364 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 ZNF528Q3MIS6 628 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 FAM214BQ7L5A3 538 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 LILRB1Q8NHL6 650 aaPredicted RBP10.11□□□□□ -0.79
PTPRN-204ENST00000423636 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 EIF5A2Q9GZV4 153 aaKnown RBP10.11□□□□□ -0.79
PTPRN-204ENST00000423636 RHOFQ9HBH0 211 aa10.11□□□□□ -0.79
PTPRN-204ENST00000423636 MLNRO43193 412 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 OR13C7P0DN81 318 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 DEFA4P12838 97 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 DTYMKP23919 212 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 OR3A1P47881 315 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 IL15RAQ13261 267 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 MSMPQ1L6U9 139 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 SWI5Q1ZZU3 235 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 MIDNQ504T8 468 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 OR2Z1Q8NG97 314 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 ABHD14BQ96IU4 210 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 LINC00470Q9BZP3 86 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 MRPS18CQ9Y3D5 142 aaKnown RBP10.1□□□□□ -0.79
PTPRN-204ENST00000423636 IGSF23A1L1A6 192 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 CEACAM18A8MTB9 384 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 ZNF724A8MTY0 619 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 M0R1B8 84 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 CHST1O43916 411 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 CECR9P0C854 216 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 ZNF14P17017 642 aaPredicted RBP10.1□□□□□ -0.79
PTPRN-204ENST00000423636 SRSF4Q08170 494 aaKnown RBP10.1□□□□□ -0.79
PTPRN-204ENST00000423636 ASCL4Q6XD76 172 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 LGI3Q8N145 548 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 OR5A2Q8NGI9 324 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 EDARQ9UNE0 448 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 SPG11Q96JI7 2443 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 ATP6V1G2-DDX39BF2Z307 99 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 SOX15O60248 233 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 KRASP01116 189 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 PPP1CCP36873 323 aaKnown RBP10.1□□□□□ -0.79
PTPRN-204ENST00000423636 SSX9Q7RTT3 188 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 STOML3Q8TAV4 291 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 ISOC2Q96AB3 205 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 OR51I2Q9H344 312 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 ZDHHC11Q9H8X9 412 aa10.1□□□□□ -0.79
PTPRN-204ENST00000423636 A0A1B0GW55 424 aa10.09□□□□□ -0.79
PTPRN-204ENST00000423636 TMEM218A2RU14 115 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms