RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ZNF581Q9P0T4 197 aa12.18□□□□□ -0.46
USB1-202ENST00000423271 DPM3Q9P2X0 92 aa12.18□□□□□ -0.46
USB1-202ENST00000423271 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
USB1-202ENST00000423271 SHISA3A0PJX4 238 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 CSTBP04080 98 aaKnown RBP12.17□□□□□ -0.46
USB1-202ENST00000423271 CD34P28906 385 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 GLP1RP43220 463 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 PAN3Q58A45 887 aaKnown RBP12.17□□□□□ -0.46
USB1-202ENST00000423271 C1orf100Q5SVJ3 147 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 C22orf42Q6IC83 251 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 RTN4RL2Q86UN3 420 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 OSR2Q8N2R0 312 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 OR51T1Q8NGJ9 327 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 OR13A1Q8NGR1 328 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 PLPPR1Q8TBJ4 325 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 ZNF596Q8TC21 504 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 VCX3AQ9NNX9 186 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 KIF25Q9UIL4 384 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 STUB1Q9UNE7 303 aa12.17□□□□□ -0.46
USB1-202ENST00000423271 AK6Q9Y3D8 172 aaKnown RBP12.17□□□□□ -0.46
USB1-202ENST00000423271 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 ZNF729A6NN14 1252 aaPredicted RBP12.16□□□□□ -0.46
USB1-202ENST00000423271 FBXO24O75426 580 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 SMIM18P0DKX4 95 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 CD37P11049 281 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 CD36P16671 472 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 GALP22466 123 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 NFYBP25208 207 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 RBM11P57052 281 aaKnown RBP12.16□□□□□ -0.46
USB1-202ENST00000423271 IL13RA2Q14627 380 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 HLA-DRB5Q30154 266 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 DTX3Q8N9I9 347 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 KIRREL1Q96J84 757 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 WNT10AQ9GZT5 417 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 TXNL4BQ9NX01 149 aaKnown RBP12.16□□□□□ -0.46
USB1-202ENST00000423271 OR6C3Q9NZP0 311 aa12.16□□□□□ -0.46
USB1-202ENST00000423271 MEIKINA0A087WXM9 373 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 A0A087X0M5 115 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 TRAV1-2A0A0B4J238 106 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 KBTBD11-OT1A0A1B0GTJ5 212 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 A0A1B0GX30 115 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 LEUTXA8MZ59 168 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 ZNF780AO75290 641 aaPredicted RBP12.15□□□□□ -0.46
USB1-202ENST00000423271 CGB3P0DN86 165 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 CGB7P0DN87 165 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 GADD45AP24522 165 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 MYL9P24844 172 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 FGF9P31371 208 aaPredicted RBP12.15□□□□□ -0.46
USB1-202ENST00000423271 VDAC2P45880 294 aaPredicted RBP12.15□□□□□ -0.46
USB1-202ENST00000423271 RBM39Q14498 530 aaKnown RBP12.15□□□□□ -0.46
USB1-202ENST00000423271 ARSJQ5FYB0 599 aaPredicted RBP12.15□□□□□ -0.46
USB1-202ENST00000423271 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 TPTE2P1Q5T6R2 138 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 RSBN1Q5VWQ0 802 aaPredicted RBP12.15□□□□□ -0.46
USB1-202ENST00000423271 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 CITED2Q99967 270 aaPredicted RBP12.15□□□□□ -0.46
USB1-202ENST00000423271 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 BANF2Q9H503 90 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 PCDHB16Q9NRJ7 776 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 CALYQ9NYX4 217 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 SSR3Q9UNL2 185 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
USB1-202ENST00000423271 TRAV39A0A0B4J263 110 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 G3V4G9 280 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 LY6LH3BQJ8 138 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 TOR1AO14656 332 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
USB1-202ENST00000423271 SLC22A1O15245 554 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 IGHV3-7P01780 117 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 OPN1MWP04001 364 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 GTF2F2P13984 249 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 HTR2CP28335 458 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 OR10A3P58181 314 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 GPR176Q14439 515 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 LTC4SQ16873 150 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 MRGPRDQ8TDS7 321 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 OCSTAMPQ9BR26 566 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 CHCHD6Q9BRQ6 235 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 SLC25A33Q9BSK2 321 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 PLGRKTQ9HBL7 147 aa12.14□□□□□ -0.47
USB1-202ENST00000423271 LOC100506127A0A0U1RQW1 187 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 SH2D7A6NKC9 451 aaPredicted RBP12.13□□□□□ -0.47
USB1-202ENST00000423271 SLC17A2O00624 439 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 PEX14O75381 377 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 CRTAPO75718 401 aaPredicted RBP12.13□□□□□ -0.47
USB1-202ENST00000423271 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
USB1-202ENST00000423271 IL1AP01583 271 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 UBBP0CG47 229 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 VSIG8P0DPA2 414 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 MGMTP16455 207 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 BRS3P32247 399 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 SSTR5P35346 364 aa12.13□□□□□ -0.47
USB1-202ENST00000423271 P2RY14Q15391 338 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms