RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TRAPPC2LQ9UL33 140 aa7.59□□□□□ -1.19
PDGFC-202ENST00000422544 HSF4Q9ULV5 492 aa7.59□□□□□ -1.19
PDGFC-202ENST00000422544 SPATA2Q9UM82 520 aa7.59□□□□□ -1.19
PDGFC-202ENST00000422544 KCNK7Q9Y2U2 307 aa7.59□□□□□ -1.19
PDGFC-202ENST00000422544 ETV7Q9Y603 341 aa7.59□□□□□ -1.19
PDGFC-202ENST00000422544 SOX21Q9Y651 276 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-202ENST00000422544 A0A075B6Q4 140 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 IGHV1-69DA0A0B4J2H0 117 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 KBTBD11-OT1A0A1B0GTJ5 212 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF729A6NN14 1252 aaPredicted RBP7.58□□□□□ -1.2
PDGFC-202ENST00000422544 RNASEK-C17orf49H0YIS7 233 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 H3BMQ9 156 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 CA11O75493 328 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 IGHV1-69P01742 117 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 FAM157CP0CG43 387 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 CGB3P0DN86 165 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 CGB7P0DN87 165 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 IGHV1-8P0DP01 117 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 GNB3P16520 340 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 GZMHP20718 246 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 OMGP23515 440 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 COX7A1P24310 79 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 CDK2P24941 298 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 GDNFP39905 211 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 SCAND1P57086 179 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 GUCA2AQ02747 115 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 LTC4SQ16873 150 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 RUSC1-AS1Q66K80 236 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 OLFML2AQ68BL7 652 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 NCR3LG1Q68D85 454 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 HCP5Q6MZN7 132 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 BAIAP2L2Q6UXY1 529 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 BRD3OSQ6XYD6 125 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 BCL6BQ8N143 479 aaPredicted RBP7.58□□□□□ -1.2
PDGFC-202ENST00000422544 GAPTQ8N292 157 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 PNKDQ8N490 385 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 RFESDQ8TAC1 157 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 UBALD1Q8TB05 177 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 MRPL30Q8TCC3 161 aaKnown RBP7.58□□□□□ -1.2
PDGFC-202ENST00000422544 SLC25A38Q96DW6 304 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 BCL7BQ9BQE9 202 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 HDHD3Q9BSH5 251 aaPredicted RBP7.58□□□□□ -1.2
PDGFC-202ENST00000422544 MS4A7Q9GZW8 240 aaPredicted RBP7.58□□□□□ -1.2
PDGFC-202ENST00000422544 GAL3ST2Q9H3Q3 398 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 HEXA-AS1Q9H8Q6 139 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 UNKLQ9H9P5 680 aaKnown RBP7.58□□□□□ -1.2
PDGFC-202ENST00000422544 CHMP1AQ9HD42 196 aaPredicted RBP7.58□□□□□ -1.2
PDGFC-202ENST00000422544 CALYQ9NYX4 217 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 COMMD3Q9UBI1 195 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF69Q9UC07 566 aa7.58□□□□□ -1.2
PDGFC-202ENST00000422544 NPIPB11E5RHQ5 1161 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 C15orf65H3BRN8 121 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 RBP4P02753 201 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 HIST1H1DP16402 221 aaKnown RBP7.57□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF182P17025 639 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-202ENST00000422544 RCC1P18754 421 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-202ENST00000422544 EPHA1P21709 976 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 SSTR5P35346 364 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 CDNFQ49AH0 187 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 HEPN1Q6WQI6 88 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 C5orf24Q7Z6I8 188 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 SAMD12Q8N8I0 201 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 DTX3Q8N9I9 347 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 SETD6Q8TBK2 473 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 ARL11Q969Q4 196 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 CMSS1Q9BQ75 279 aaKnown RBP7.57□□□□□ -1.2
PDGFC-202ENST00000422544 SUCNR1Q9BXA5 334 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 RBM38Q9H0Z9 239 aaKnown RBP7.57□□□□□ -1.2
PDGFC-202ENST00000422544 ELF5Q9UKW6 265 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-202ENST00000422544 SESN1Q9Y6P5 492 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 KIAA2026Q5HYC2 2103 aa7.57□□□□□ -1.2
PDGFC-202ENST00000422544 TRAV18A0A075B6X5 111 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 FAM172BPA6NC97 362 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 C12orf77C9JDV5 145 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 MFNGO00587 321 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 NPFFO15130 113 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 ORC5O43913 435 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 HPGDSO60760 199 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 CLPXO76031 633 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 SCGNO76038 276 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 NAPSAO96009 420 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 CD3GP09693 182 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 FPR2P25090 351 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 NFYBP25208 207 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 UBE2E1P51965 193 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 UBE2NLQ5JXB2 153 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 UTF1Q5T230 341 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 C6orf183Q5T699 404 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 Q6ZPA2 131 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 IZUMO1Q8IYV9 350 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 PRR18Q8N4B5 295 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 OR13D1Q8NGV5 346 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 DYNC2LI1Q8TCX1 351 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 ACOT12Q8WYK0 555 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 AP3S1Q92572 193 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 PHF21AQ96BD5 680 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 S100A16Q96FQ6 103 aaKnown RBP7.56□□□□□ -1.2
PDGFC-202ENST00000422544 KIRREL1Q96J84 757 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 SLC6A7Q99884 636 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 ABCG5Q9H222 651 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms