RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PRR18Q8N4B5 295 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 TMUB1Q9BVT8 246 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 NCOR1P1Q9H4R4 102 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 MBNL3Q9NUK0 354 aaKnown RBP12.92□□□□□ -0.34
DDX55-203ENST00000421670 UBE2J1Q9Y385 318 aaPredicted RBP12.92□□□□□ -0.34
DDX55-203ENST00000421670 SONP18583 2426 aaKnown RBP12.91□□□□□ -0.34
DDX55-203ENST00000421670 C12orf77C9JDV5 145 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 ZNF728P0DKX0 622 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 OMGP23515 440 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 PRSS3P35030 304 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 DLX1P56177 255 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 DLX6P56179 175 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 PRB3Q04118 309 aaPredicted RBP12.91□□□□□ -0.34
DDX55-203ENST00000421670 SPANXN2Q5MJ10 180 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 ZNF880Q6PDB4 577 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 BAIAP2L2Q6UXY1 529 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 GVQW1Q8N7I0 195 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 ZNF565Q8N9K5 539 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 CORO2AQ92828 525 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 RIMS4Q9H426 269 aaPredicted RBP12.91□□□□□ -0.34
DDX55-203ENST00000421670 CALYQ9NYX4 217 aa12.91□□□□□ -0.34
DDX55-203ENST00000421670 NSD1Q96L73 2696 aaPredicted RBP12.91□□□□□ -0.34
DDX55-203ENST00000421670 TRBV6-6A0A0A6YYG2 114 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 CD99P14209 185 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 PITPNAQ00169 270 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 ZNF79Q15937 498 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 C17orf58Q2M2W7 97 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 C6orf183Q5T699 404 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 PRAMEF5Q5TYX0 476 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 PYHIN1Q6K0P9 492 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 FAHD2BQ6P2I3 314 aaPredicted RBP12.9□□□□□ -0.34
DDX55-203ENST00000421670 MOB1BQ7L9L4 216 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 Q8N7P7 452 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 RFESDQ8TAC1 157 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 FAHD2AQ96GK7 314 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 SOSTQ9BQB4 213 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 GAL3ST2Q9H3Q3 398 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 TAF9BQ9HBM6 251 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 Q9N2K0 584 aa12.9□□□□□ -0.34
DDX55-203ENST00000421670 ANK3Q12955 4377 aaKnown RBP12.9□□□□□ -0.34
DDX55-203ENST00000421670 IGKV1D-8A0A087WSZ0 117 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 A0A1W2PPH5 198 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 ZNF729A6NN14 1252 aaPredicted RBP12.9□□□□□ -0.35
DDX55-203ENST00000421670 C15orf65H3BRN8 121 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 MMP23AO75900 390 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 LPLP06858 475 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 CGB3P0DN86 165 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 CGB7P0DN87 165 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 DTYMKP23919 212 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 DGCR2P98153 550 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 LTC4SQ16873 150 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 CR1LQ2VPA4 569 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 METTL11BQ5VVY1 283 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 ZNF782Q6ZMW2 699 aaPredicted RBP12.9□□□□□ -0.35
DDX55-203ENST00000421670 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 KIR3DL3Q8N743 410 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 OR52I2Q8NH67 350 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 ARL11Q969Q4 196 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 PCGF1Q9BSM1 259 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 ST6GALNAC5Q9BVH7 336 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 SIRT7Q9NRC8 400 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 TAS2R3Q9NYW6 316 aa12.9□□□□□ -0.35
DDX55-203ENST00000421670 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 FAM172BPA6NC97 362 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 CD5LO43866 347 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 HBZP02008 142 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 GDNFP39905 211 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 ETV6P41212 452 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 HLA-DRB3P79483 266 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 PAX8Q06710 450 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 HMGN3Q15651 99 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 OR1L1Q8NH94 360 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 GPX8Q8TED1 209 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 TMPRSS13Q9BYE2 586 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 SIRPDQ9H106 197 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 IFT46Q9NQC8 304 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 KPTNQ9Y664 436 aa12.89□□□□□ -0.35
DDX55-203ENST00000421670 C17orf98A8MV24 154 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 M0R1W7 72 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 TPPPO94811 219 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 TOX4O94842 621 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 SCTP09683 121 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 MMP9P14780 707 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 GZMHP20718 246 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 GATA3P23771 443 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 PYDC2Q56P42 97 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 OR52W1Q6IF63 320 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 TRAT1Q6PIZ9 186 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 VMO1Q7Z5L0 202 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 MFSD4AQ8N468 514 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 IL1F10Q8WWZ1 152 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 SNAPC3Q92966 411 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 KIRREL1Q96J84 757 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 OCSTAMPQ9BR26 566 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 C7orf69Q9H7B7 122 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 SCPEP1Q9HB40 452 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 AKIP1Q9NQ31 210 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 OPN4Q9UHM6 478 aa12.88□□□□□ -0.35
DDX55-203ENST00000421670 IGHV3-43A0A0B4J1X8 118 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms