RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SUMF2Q8NBJ7 301 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 TMEM104Q8NE00 496 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 TNFAIP8L1Q8WVP5 186 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 C4orf3Q8WVX3 66 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 ST6GALNAC6Q969X2 333 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 CENPNQ96H22 339 aaPredicted RBP13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 S1PR3Q99500 378 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 GPER1Q99527 375 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 RASL11BQ9BPW5 248 aa13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 DPCDQ9BVM2 203 aaPredicted RBP13.19□□□□□ -0.3
UPF3AP3-201ENST00000420996 TMEM212A6NML5 194 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 GABRPO00591 440 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 MAGEB3O15480 346 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 MOSP00540 346 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 RAB3AP20336 220 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 CFHR3Q02985 330 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 FHL3Q13643 280 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 GALEQ14376 348 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 SATL1Q86VE3 508 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 SYS1Q8N2H4 156 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 OR8H1Q8NGG4 311 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 OR10K1Q8NGX5 313 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 OR5AK2Q8NH90 309 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 RTN4IP1Q8WWV3 396 aaPredicted RBP13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 DHDHQ9UQ10 334 aa13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 ZNF256Q9Y2P7 627 aaPredicted RBP13.18□□□□□ -0.3
UPF3AP3-201ENST00000420996 C15orf65H3BRN8 121 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 HTR3BO95264 441 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 IL3RAP26951 378 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 ZNF260Q3ZCT1 412 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 LHFPL3Q86UP9 236 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 TSEN15Q8WW01 171 aaKnown RBP13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 ARL11Q969Q4 196 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 PDCD1LG2Q9BQ51 273 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 ALG8Q9BVK2 526 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 ISG20L2Q9H9L3 353 aaKnown RBP13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 ZNF581Q9P0T4 197 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 ST3GAL6Q9Y274 331 aa13.17□□□□□ -0.3
UPF3AP3-201ENST00000420996 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 SAC3D1A6NKF1 404 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 SDCBPO00560 298 aaPredicted RBP13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 OR7C1O76099 320 aaPredicted RBP13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 VDAC1P21796 283 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 PSMB8P28062 276 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 SOX6P35712 828 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 INSL3P51460 131 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 MRPL28Q13084 256 aaKnown RBP13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 Q3ZCU0 254 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 FAM71E2Q8N5Q1 922 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 OR11H1Q8NG94 326 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 OR51A2Q8NGJ7 313 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 LGALS12Q96DT0 336 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 HSPB9Q9BQS6 159 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 FAM192AQ9GZU8 254 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 GFOD1Q9NXC2 390 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 SMAD5-AS1Q9Y6J3 95 aa13.16□□□□□ -0.3
UPF3AP3-201ENST00000420996 ZNF736B4DX44 427 aaPredicted RBP13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 E9PI62 339 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 ORC5O43913 435 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 IGF1P05019 195 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 F2RL1P55085 397 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 RBM11P57052 281 aaKnown RBP13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 CASC10Q5T4H9 136 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 C1orf146Q5VVC0 180 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 MYOZ3Q8TDC0 251 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 KCTD7Q96MP8 289 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 CHCHD6Q9BRQ6 235 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 IL36GQ9NZH8 169 aa13.15□□□□□ -0.3
UPF3AP3-201ENST00000420996 SORL1Q92673 2214 aa13.15□□□□□ -0.31
UPF3AP3-201ENST00000420996 TXNL1O43396 289 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 CDRT1O95170 752 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 LY86O95711 162 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 OR5H8P0DN80 308 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 FAM53AQ6NSI3 398 aaPredicted RBP13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 LINC00596Q86U02 117 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 UBALD1Q8TB05 177 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 CCDC107Q8WV48 283 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 UBE2E2Q96LR5 201 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 METTL9Q9H1A3 318 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 ING4Q9UNL4 249 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 ORC6Q9Y5N6 252 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 STAB2Q8WWQ8 2551 aa13.14□□□□□ -0.31
UPF3AP3-201ENST00000420996 IGHV3-43A0A0B4J1X8 118 aa13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 GEMIN2O14893 280 aaKnown RBP13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 MT-ND4P03905 459 aa13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 CSTBP04080 98 aaKnown RBP13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 ALPLP05186 524 aa13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 IGHV3-43DP0DP04 118 aa13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 SOX2P48431 317 aa13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 ZNF137PP52743 207 aa13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 GBX2P52951 348 aaPredicted RBP13.13□□□□□ -0.31
UPF3AP3-201ENST00000420996 RUNX1Q01196 453 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms