RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PLAUP00749 431 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 CTSDP07339 412 aaPredicted RBP17.58■□□□□ 0.4
GPC1-202ENST00000420138 AADACP22760 399 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 LOXP28300 417 aaPredicted RBP17.58■□□□□ 0.4
GPC1-202ENST00000420138 OR3A1P47881 315 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 HLA-DRB3P79483 266 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 COL10A1Q03692 680 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 KCTD9Q7L273 389 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 LILRB1Q8NHL6 650 aaPredicted RBP17.58■□□□□ 0.4
GPC1-202ENST00000420138 Q8TCH9 128 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 ITLN2Q8WWU7 325 aaPredicted RBP17.58■□□□□ 0.4
GPC1-202ENST00000420138 SHARPINQ9H0F6 387 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 SEBOXQ9HB31 216 aaPredicted RBP17.58■□□□□ 0.4
GPC1-202ENST00000420138 COMMD9Q9P000 198 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 ZFYVE26Q68DK2 2539 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 CCSO14618 274 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 C1QL1O75973 258 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 CLDN14O95500 239 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 SFT2D2O95562 160 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 CFDP00746 253 aaPredicted RBP17.57■□□□□ 0.4
GPC1-202ENST00000420138 CD3EP07766 207 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 PGAM2P15259 253 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 RPA2P15927 270 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 AGAP20933 346 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 PRDX2P32119 198 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 MST1LQ2TV78 715 aa17.57■□□□□ 0.4
GPC1-202ENST00000420138 ZCCHC24Q8N2G6 241 aaKnown RBP17.57■□□□□ 0.4
GPC1-202ENST00000420138 A0A0B4J2A0 478 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 TUBAL3A6NHL2 446 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 DBX1A6NMT0 343 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 H7C1Q1 480 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 ZNF737O75373 536 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 TUSC2O75896 110 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 PPYP01298 95 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 GLP1RP43220 463 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 TMEM65Q6PI78 240 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 CLEC18BQ6UXF7 455 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 TGIF2LYQ8IUE0 185 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 ZNF808Q8N4W9 903 aaPredicted RBP17.56■□□□□ 0.4
GPC1-202ENST00000420138 COQ2Q96H96 371 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 DIRC2Q96SL1 478 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 CABLES2Q9BTV7 478 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 SHPKQ9UHJ6 478 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 BET1O15155 118 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 ZNF728P0DKX0 622 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 TNFSF4P23510 183 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 UCP3P55916 312 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 FXYD4P59646 89 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 BEX5Q5H9J7 111 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 FAM201AQ5SY85 155 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 BOLLQ8N9W6 283 aaKnown RBP17.56■□□□□ 0.4
GPC1-202ENST00000420138 OR4A4PQ8NGN8 299 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 FAM222BQ8WU58 562 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 TOMM40LQ969M1 308 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 ERGIC1Q969X5 290 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 SEC22AQ96IW7 307 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 MFFQ9GZY8 342 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 ARL6Q9H0F7 186 aa17.56■□□□□ 0.4
GPC1-202ENST00000420138 CHD3Q12873 2000 aaKnown RBP17.55■□□□□ 0.4
GPC1-202ENST00000420138 IGHV3OR15-7A0A075B7D8 119 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 LINC00862A6NCI5 91 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 DEFB108AA8MXU0 73 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 FAM25EA8MYX2 175 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 RP2O75695 350 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 CTXN2P0C2S0 81 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 SLC25A4P12235 298 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 CCL8P80075 99 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 CLLU1Q5K131 121 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 SLC35E4Q6ICL7 350 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 MOB1BQ7L9L4 216 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 ZNF546Q86UE3 836 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 RNF7Q9UBF6 113 aa17.55■□□□□ 0.4
GPC1-202ENST00000420138 C14orf166Q9Y224 244 aaKnown RBP17.55■□□□□ 0.4
GPC1-202ENST00000420138 TRBV6-7A0A0A0MS04 114 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 TK1P04183 234 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 AESQ08117 197 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 C11orf87Q6NUJ2 197 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 DCAF16Q9NXF7 216 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 TRAPPC2LQ9UL33 140 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 RNF115Q9Y4L5 304 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 VSTM5A8MXK1 200 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 CYB5R3P00387 301 aaPredicted RBP17.54■□□□□ 0.4
GPC1-202ENST00000420138 APOBEC3AP31941 199 aaPredicted RBP17.54■□□□□ 0.4
GPC1-202ENST00000420138 CD80P33681 288 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 KCNJ3P48549 501 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 RAB14P61106 215 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 PAX5Q02548 391 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 SLC9A3R2Q15599 337 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 HMGN3Q15651 99 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 EFNB3Q15768 340 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 ANKRD55Q3KP44 614 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 COQ8AQ8NI60 647 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 ANGPTL6Q8NI99 470 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 KIRREL1Q96J84 757 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 TMEM204Q9BSN7 226 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 RSRP1Q9BUV0 290 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 PRR13Q9NZ81 148 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 DNAJB11Q9UBS4 358 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 PCDHB10Q9UN67 800 aa17.54■□□□□ 0.4
GPC1-202ENST00000420138 TMEM30CPA0ZSE6 113 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms