RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MMP26Q9NRE1 261 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 KCNIP1Q9NZI2 227 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 IGHV2OR16-5A0A0B4J2B6 119 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 HS3ST1O14792 307 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PTBP3O95758 552 aaKnown RBP12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 BAXQ07812 192 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ZNF266Q14584 549 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SLC35E4Q6ICL7 350 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OR10V1Q8NGI7 309 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SMIM8Q96KF7 97 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TOLLIPQ9H0E2 274 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM212BQ9NTI7 297 aaPredicted RBP12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SLC25A15Q9Y619 301 aa12.33□□□□□ -0.44
HLA-DPA1-242ENST00000419277 IGKV1-6A0A0C4DH72 117 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 CDIPTO14735 213 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 HAND1O96004 215 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ZNF250P15622 560 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 CFHR2P36980 270 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SULT1A2P50226 295 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TMEM33P57088 247 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SP6Q3SY56 376 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 NMSQ5H8A3 153 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM74A1Q5RGS3 127 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OR11L1Q8NGX0 322 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LSM10Q969L4 123 aaKnown RBP12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 GTF3C1Q12789 2109 aa12.32□□□□□ -0.44
HLA-DPA1-242ENST00000419277 HSPB6O14558 160 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SCGB1D2O95969 90 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM180AQ6UWF9 173 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SPAG16Q8N0X2 631 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 COMMD1Q8N668 190 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ZNF610Q8N9Z0 462 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TMED6Q8WW62 240 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 MUCL1Q96DR8 90 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 CCDC120Q96HB5 630 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ZNF488Q96MN9 340 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 IGHV1-18A0A0C4DH31 117 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 A0A1B0GU03 582 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OOEPA6NGQ2 149 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 MLNRO43193 412 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 KLK10O43240 276 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SERPINE2P07093 398 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 F2RL1P55085 397 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FOXF2Q12947 444 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SELENOHQ8IZQ5 122 aaKnown RBP12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LHFPL5Q8TAF8 219 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LINC00052Q96N35 136 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 NARFLQ9H6Q4 476 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
HLA-DPA1-242ENST00000419277 IGKV1D-13A0A0B4J2D9 117 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 A0A1W2PR80 420 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 HSPA12AO43301 675 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PGLYRP1O75594 196 aaPredicted RBP12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ATG12O94817 140 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 CRYAAP02489 173 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM157CP0CG43 387 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 IGKV1-13P0DP09 117 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 CEACAM8P31997 349 aaPredicted RBP12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 MPV17P39210 176 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ERVS71-1P61550 626 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ACP7Q6ZNF0 438 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 BATF2Q8N1L9 274 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PPP1R35Q8TAP8 253 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM57AQ8TBR7 257 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PLEKHF2Q9H8W4 249 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 RAB9BQ9NP90 201 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 WASF3Q9UPY6 502 aa12.3□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ZNF705EA8MWA4 302 aaPredicted RBP12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SIRPB1O00241 398 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 HEXAP06865 529 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 RCC1P18754 421 aaPredicted RBP12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 GLRXP35754 106 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 RPL7L1Q6DKI1 246 aaKnown RBP12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OR2C3Q8N628 320 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OPN3Q9H1Y3 402 aaPredicted RBP12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 CCL28Q9NRJ3 127 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LYRM2Q9NU23 88 aaPredicted RBP12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ASF1BQ9NVP2 202 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TINAGQ9UJW2 476 aa12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 RCL1Q9Y2P8 373 aaKnown RBP12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PITX3O75364 302 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ZNF205O95201 554 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms