RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 FGF8P55075 233 aaPredicted RBP13□□□□□ -0.33
SEMA3B-203ENST00000419007 IL11RAQ14626 422 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 NMSQ5H8A3 153 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 CDPF1Q6NVV7 123 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 SPNS3Q6ZMD2 512 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 ODF3L1Q8IXM7 274 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 OR2Y1Q8NGV0 311 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 UBALD1Q8TB05 177 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 GAR1Q9NY12 217 aaKnown RBP13□□□□□ -0.33
SEMA3B-203ENST00000419007 TRAV39A0A0B4J263 110 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 MRPL33O75394 65 aaKnown RBP13□□□□□ -0.33
SEMA3B-203ENST00000419007 IAPPP10997 89 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 HOXA5P20719 270 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 ID3Q02535 119 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 TLE1Q04724 770 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 PYY3Q5JQD4 70 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 OR10D4PQ8NGN7 298 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 TINAGQ9UJW2 476 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 NOSIPQ9Y314 301 aaKnown RBP13□□□□□ -0.33
SEMA3B-203ENST00000419007 RBM7Q9Y580 266 aaKnown RBP13□□□□□ -0.33
SEMA3B-203ENST00000419007 CUL9Q8IWT3 2517 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 CACNA1DQ01668 2161 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 A0A0G2JRQ6 117 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 C1QL4Q86Z23 238 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 MKXQ8IYA7 352 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 ATP5SQ99766 215 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 CALHM2Q9HA72 323 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 KIAA1549Q9HCM3 1950 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 KNTC1P50748 2209 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 IGKV1-6A0A0C4DH72 117 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 SYNGR1O43759 233 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 CDX1P47902 265 aaPredicted RBP12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 OR2B11Q5JQS5 317 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 CLDND2Q8NHS1 167 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 KCNE4Q8WWG9 221 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 SGCZQ96LD1 299 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 YPEL4Q96NS1 127 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 R4GN57 208 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 CACNA1HO95180 2353 aa12.99□□□□□ -0.33
SEMA3B-203ENST00000419007 KIR2DS1A0A191URI9 304 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 IFITM10A6NMD0 228 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 K7ESF4 209 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 PGLYRP1O75594 196 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 UCP1P25874 307 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 KIR2DS4P43632 304 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 NKX6-1P78426 367 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 KIR2DS1Q14954 304 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 LINC00469Q8N7U9 141 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2AAQ96QV6 131 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 SH2D2AQ9NP31 389 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 TAAR3PQ9P1P4 343 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 ERRFI1Q9UJM3 462 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 SLC34A2O95436 690 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 HBE1P02100 147 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 PSG2P11465 335 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 S100GP29377 79 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 TAS2R30P59541 319 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 FGF12P61328 243 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 BAXQ07812 192 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 ZDHHC23Q8IYP9 409 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 SCGB1C1Q8TD33 95 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 PSMF1Q92530 271 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 FGF23Q9GZV9 251 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF665Q9H7R5 613 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 NCKAP5O14513 1909 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 DNPH1O43598 174 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 NAPSAO96009 420 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 MMP7P09237 267 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 METTL15P1P0C7V9 234 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 CD200P41217 278 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 HLA-DRB3P79483 266 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF506Q5JVG8 444 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 C20orf204Q6ZNR8 217 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 PLPPR1Q8TBJ4 325 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 RBMXL1Q96E39 390 aaKnown RBP12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 TECTBQ96PL2 329 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 GPR61Q9BZJ8 451 aa12.98□□□□□ -0.33
SEMA3B-203ENST00000419007 TECTAO75443 2155 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BKO60814 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 CNOT4O95628 575 aaKnown RBP12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 LY86O95711 162 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 NGFP01138 241 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BJP06899 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 MDKP21741 143 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BOP23527 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BBP33778 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 FOXG1P55316 489 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BDP58876 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BCP62807 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 IGFBP7Q16270 282 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST2H2BEQ16778 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 MYPOPQ86VE0 399 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF383Q8NA42 475 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BHQ93079 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 GPR146Q96CH1 333 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms