RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 BSPH1Q075Z2 132 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ZNF345Q14585 488 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ATXN7L3Q14CW9 347 aaPredicted RBP7.11□□□□□ -1.27
USP54-203ENST00000418501 Q5BKY6 102 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ZNF497Q6ZNH5 498 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 BIVMQ86UB2 503 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 PRR18Q8N4B5 295 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 MRPL30Q8TCC3 161 aaKnown RBP7.11□□□□□ -1.27
USP54-203ENST00000418501 Q8TCH9 128 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ARL11Q969Q4 196 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 HDHD3Q9BSH5 251 aaPredicted RBP7.11□□□□□ -1.27
USP54-203ENST00000418501 C5orf66Q9H5L9 145 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 TAF9BQ9HBM6 251 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ELF5Q9UKW6 265 aaPredicted RBP7.11□□□□□ -1.27
USP54-203ENST00000418501 C17orf100A8MU93 164 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 E5RGE8 158 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 F5H0A9 414 aaPredicted RBP7.11□□□□□ -1.27
USP54-203ENST00000418501 SCGB1D2O95969 90 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 CD8AP01732 235 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ZNF16P17020 682 aaPredicted RBP7.11□□□□□ -1.27
USP54-203ENST00000418501 AGAP20933 346 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 RAB2AP61019 212 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 NCMAPQ5T1S8 102 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 OR1S1Q8NH92 325 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 TMEM171Q8WVE6 324 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 PLPPR2Q96GM1 343 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ZNF488Q96MN9 340 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 PRORYQ9H606 182 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 NSG2Q9Y328 171 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 C5orf42Q9H799 3197 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 PPIAL4EA0A075B759 164 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 B8ZZF3 427 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 PPIAL4DF5H284 164 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 CD55P08174 381 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 PPIAL4FP0DN26 164 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 MEX3BQ6ZN04 569 aaKnown RBP7.11□□□□□ -1.27
USP54-203ENST00000418501 TMUB2Q71RG4 321 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 FAM219AQ8IW50 185 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 BATF2Q8N1L9 274 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 OR2S2Q9NQN1 319 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 PPIAL4AQ9Y536 164 aa7.11□□□□□ -1.27
USP54-203ENST00000418501 ZNF407Q9C0G0 2248 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 H0Y980 276 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 HSD17B6O14756 317 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 HMGB3O15347 200 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 RHBDL1O75783 438 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 CEACAM6P40199 344 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 EDDM3AQ14507 147 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 PDCD1Q15116 288 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 LRRC37A5PQ49AS3 106 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 SLC25A24Q6NUK1 477 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 PRSS54Q6PEW0 395 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 MRPL41Q8IXM3 137 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 ZNF471Q9BX82 626 aaPredicted RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 HES4Q9HCC6 221 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 JPT1Q9UK76 154 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 TRAV24A0A0B4J272 114 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 TEX46H3BTG2 121 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 ST8SIA5O15466 376 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 RBMXL2O75526 392 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 CXCL3P19876 107 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 GPR12P47775 334 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 ARHGDIBP52566 201 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 SRSF4Q08170 494 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 BAMBIQ13145 260 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 Q6P435 159 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 ZNF66Q6ZN08 573 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 PPP1R1CQ8WVI7 109 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 C14orf79Q96F83 325 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 HSD17B10Q99714 261 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 MRPL37Q9BZE1 423 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 KIF25Q9UIL4 384 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 URB1O60287 2271 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 TRBV6-7A0A0A0MS04 114 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 K7EPK0 472 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 ZNHIT1O43257 154 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 PTBP3O95758 552 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 MMP9P14780 707 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 OR3A1P47881 315 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 GPR157Q5UAW9 335 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 BRICD5Q6PL45 260 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 C17orf107Q6ZR85 190 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 H1FOOQ8IZA3 346 aaPredicted RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 FAM71E2Q8N5Q1 922 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 ADAD2Q8NCV1 583 aaKnown RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 RAB1CQ92928 201 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 S1PR3Q99500 378 aa7.1□□□□□ -1.27
USP54-203ENST00000418501 FAM212BQ9NTI7 297 aaPredicted RBP7.1□□□□□ -1.27
USP54-203ENST00000418501 GPR37O15354 613 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 SIX6O95475 246 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 VDAC1P21796 283 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 TAGLNQ01995 201 aaKnown RBP7.09□□□□□ -1.27
USP54-203ENST00000418501 MEF2CQ06413 473 aaPredicted RBP7.09□□□□□ -1.27
USP54-203ENST00000418501 SWI5Q1ZZU3 235 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 TMEM268Q5VZI3 342 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 OR8H3Q8N146 312 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 OR10A7Q8NGE5 316 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 FAM222BQ8WU58 562 aa7.09□□□□□ -1.27
USP54-203ENST00000418501 RBPMSQ93062 196 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms