RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NKX6-3A6NJ46 265 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 H0Y8X5 98 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 K7EP13 123 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 CCL25O15444 150 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 CD33P20138 364 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 GNRHRP30968 328 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 KLF3P57682 345 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 MFAP5Q13361 173 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 SMAD4Q13485 552 aaKnown RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 RABEPKQ7Z6M1 372 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 ADPRHL1Q8NDY3 354 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 CMTM2Q8TAZ6 248 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 MMABQ96EY8 250 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 PGAM5Q96HS1 289 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 BMFQ96LC9 184 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 NCOA6Q14686 2063 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 COL5A1P20908 1838 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 KIAA0100Q14667 2235 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 NXPH3O95157 252 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 PLCXD2Q0VAA5 305 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM41BQ5BJD5 291 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 BTF3L4Q96K17 158 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 MANBALQ9NQG1 85 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 NDUFB8O95169 186 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 FOSL2P15408 326 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 CTSSP25774 331 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 PAFAH1B2P68402 229 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF776Q68DI1 518 aaPredicted RBP6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 RTL10Q7L3V2 364 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM144Q7Z5S9 345 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 DTX1Q86Y01 620 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 MRPL30Q8TCC3 161 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF721Q8TF20 911 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM234Q8WY98 164 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 WDYHV1Q96HA8 205 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 NUDT22Q9BRQ3 303 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM9BQ9NQ34 198 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 TAAR3PQ9P1P4 343 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 RP1P56715 2156 aa6.9□□□□□ -1.3
HMGXB4-202ENST00000418170 A0A0U1RQV5 110 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 A0A1W2PNV4 684 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 H3BP45 60 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 VENTXO95231 258 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 GYPAP02724 150 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 UCP1P25874 307 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 PTTG1IPP53801 180 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 CLRN1P58418 232 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 SFTPA2Q8IWL1 248 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF295-AS1Q8N0V1 137 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 NAT6Q93015 286 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 PINX1Q96BK5 328 aaKnown RBP6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 CIB3Q96Q77 187 aaPredicted RBP6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 SPAG17Q6Q759 2223 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 ASPMQ8IZT6 3477 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 TNFSF12O43508 249 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 PIAS2O75928 621 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 TPPP2P59282 170 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 RAC1P63000 192 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 TMEM267Q0VDI3 215 aaPredicted RBP6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 RIPPLY2Q5TAB7 128 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 Q6ZSR3 168 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 CALHM1Q8IU99 346 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 C20orf196Q8IYI0 205 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 LHX4Q969G2 390 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 FAM131CQ96AQ9 280 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 TECTBQ96PL2 329 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 GSX1Q9H4S2 264 aaPredicted RBP6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 PLSCR2Q9NRY7 297 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 LANCL2Q9NS86 450 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 PIGLQ9Y2B2 252 aa6.9□□□□□ -1.31
HMGXB4-202ENST00000418170 ANGPTL7O43827 346 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 PDGFBP01127 241 aaPredicted RBP6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 OR8B8Q15620 311 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 Q6ZPA2 131 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 MRPL43Q8N983 215 aaKnown RBP6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 LRP4O75096 1905 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 RTTNQ86VV8 2226 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 IGHG1P01857 330 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 HNRNPA1P09651 372 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 ESDP10768 282 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 CDKN1AP38936 164 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 PSMB3P49720 205 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 RNPS1Q15287 305 aaKnown RBP6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 MMDQ15546 238 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 BRICD5Q6PL45 260 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC25A47Q6Q0C1 308 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF525Q8N782 197 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 STPG4Q8N801 248 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 C10orf35Q96D05 121 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 RNF208Q9H0X6 261 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 ALKBH4Q9NXW9 302 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 A0A0U1RQK1 487 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF320A2RRD8 509 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 LIPT2A6NK58 231 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 SYNGR4O95473 234 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 HNRNPA2B1P22626 353 aaKnown RBP6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 CEACAM8P31997 349 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms