RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 CISD1Q9NZ45 108 aaKnown RBP16.24■□□□□ 0.19
SHANK3-202ENST00000414786 EIF3GO75821 320 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHANK3-202ENST00000414786 C1QBP02746 253 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 A0A0A6YYD5 115 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 ZNF735P0CB33 412 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 EPHA8P29322 1005 aaPredicted RBP16.24■□□□□ 0.19
SHANK3-202ENST00000414786 HOXC8P31273 242 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 FCGR2BP31994 310 aaPredicted RBP16.24■□□□□ 0.19
SHANK3-202ENST00000414786 SNRPEP62304 92 aaKnown RBP16.24■□□□□ 0.19
SHANK3-202ENST00000414786 PNLIPRP3Q17RR3 467 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 RHBDD2Q6NTF9 364 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 GAPTQ8N292 157 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 LSMEM1Q8N8F7 131 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 PPIAL4EA0A075B759 164 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 PPIAL4DF5H284 164 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 PPIAL4FP0DN26 164 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 OR52M1Q8NGK5 317 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 VN1R17PQ8TDU5 208 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 PPIAL4AQ9Y536 164 aa16.24■□□□□ 0.19
SHANK3-202ENST00000414786 ZAR1LA6NP61 321 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 ELOBQ15370 118 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 ASCL5Q7RTU5 278 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 SPSB1Q96BD6 273 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 CCL28Q9NRJ3 127 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 PHLDA3Q9Y5J5 127 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 hCG_38984A0A1B0GV85 526 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 SHPRHQ149N8 1683 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 EID2BQ96D98 161 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 PTBP1P26599 531 aaKnown RBP eCLIP16.23■□□□□ 0.194e-6■□□□□ 8.9
SHANK3-202ENST00000414786 CTF1Q16619 201 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 NSUN5P1Q3KNT7 163 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 HSPB2A8KAH6 182 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 B4E171 279 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 HSPB2Q16082 182 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 LRRC75BQ2VPJ9 315 aa16.23■□□□□ 0.19
SHANK3-202ENST00000414786 ADAP1O75689 374 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 FCGR3AP08637 254 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 TMEM255AQ5JRV8 349 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 GPA33Q99795 319 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 NPIPB6E9PJ23 425 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 TMPRSS3P57727 454 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 ATP1A1-AS1Q5TC04 95 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 CBLN3Q6UW01 205 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 SPICQ8N5J4 248 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 FOXJ3Q9UPW0 622 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 CT62P0C5K7 136 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 FAM106CPP0CH98 169 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 WDFY1Q8IWB7 410 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 LINC01560Q8TB33 94 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 TNFRSF12AQ9NP84 129 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 B4GALNT1Q00973 533 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 OR4A5Q8NH83 315 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 WNT16Q9UBV4 365 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 FUT9Q9Y231 359 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 TMEM189A5PLL7 270 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 CD74P04233 296 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 SLC25A19Q9HC21 320 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 NPFFO15130 113 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 STPG1Q5TH74 334 aa16.22■□□□□ 0.19
SHANK3-202ENST00000414786 COLQQ9Y215 455 aaPredicted RBP16.22■□□□□ 0.19
SHANK3-202ENST00000414786 IGLV3-10A0A075B6K4 115 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 C9orf170A2RU37 121 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 BTG1P62324 171 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 TRA2AQ13595 282 aaKnown RBP eCLIP16.21■□□□□ 0.19
SHANK3-202ENST00000414786 C1orf185Q5T7R7 199 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 UBE2DNLQ8IWF7 75 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 CACFD1Q9UGQ2 172 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 TSPAN13O95857 204 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 ASAH1Q13510 395 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 NKG7Q16617 165 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 C2orf83Q53S99 150 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 RAB40CQ96S21 281 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 MS4A5Q9H3V2 200 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 LILRA5A6NI73 299 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 PLPP3O14495 311 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 CST2P09228 141 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 ACVR1Q04771 509 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 CA2P00918 260 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 PSG2P11465 335 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 GLULP15104 373 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 OR2W3Q7Z3T1 314 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 ABHD14BQ96IU4 210 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 SIAH2O43255 324 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 PRB4P10163 310 aaPredicted RBP16.21■□□□□ 0.19
SHANK3-202ENST00000414786 AANATQ16613 207 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 C1QL3Q5VWW1 255 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 CLEC18BQ6UXF7 455 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 PTP4A1Q93096 173 aa16.21■□□□□ 0.19
SHANK3-202ENST00000414786 MAP1BP46821 2468 aaKnown RBP16.21■□□□□ 0.18
SHANK3-202ENST00000414786 TRDCB7Z8K6 153 aa16.21■□□□□ 0.18
SHANK3-202ENST00000414786 CELA2AP08217 269 aa16.21■□□□□ 0.18
SHANK3-202ENST00000414786 OR10G8Q8NGN5 311 aa16.21■□□□□ 0.18
SHANK3-202ENST00000414786 VSTM2AQ8TAG5 236 aa16.21■□□□□ 0.18
SHANK3-202ENST00000414786 FAM60AQ9NP50 221 aa16.21■□□□□ 0.18
SHANK3-202ENST00000414786 J3QR06 171 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 CDKN2AP42771 156 aaKnown RBP16.2■□□□□ 0.18
SHANK3-202ENST00000414786 FAHD1Q6P587 224 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 BPIFA4PQ86YQ2 179 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 CALHM1Q8IU99 346 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 SFRP2Q96HF1 295 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms