RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CDK6Q00534 326 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 RELAQ04206 551 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 LRRC74AQ0VAA2 488 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 FAM53BQ14153 422 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 SPCS2Q15005 226 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 MAPK14Q16539 360 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 DEFB110Q30KQ9 67 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 COX19Q49B96 90 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 RBM48Q5RL73 367 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ANXA8L1Q5VT79 327 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 C12orf73Q69YU5 71 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 Q6ZSR6 202 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 RBM45Q8IUH3 476 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 CA13Q8N1Q1 262 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 TBC1D19Q8N5T2 526 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR5T3Q8NGG3 340 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF675Q8TD23 568 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF721Q8TF20 911 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 CYGBQ8WWM9 190 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 PPWD1Q96BP3 646 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 C12orf43Q96C57 262 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 YIPF6Q96EC8 236 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 NRBF2Q96F24 287 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR10C1Q96KK4 312 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR7D2Q96RA2 312 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRSS27Q9BQR3 290 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF649Q9BS31 505 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF2Q9BSG1 426 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 UGT2B28Q9BY64 529 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 PLA2G12AQ9BZM1 189 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 PCBD2Q9H0N5 130 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR51I1Q9H343 314 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 Q9H521 79 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 NMNAT1Q9HAN9 279 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 MRPS30Q9NP92 439 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 DDX18Q9NVP1 670 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 MAT2BQ9NZL9 334 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 PDP1Q9P0J1 537 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 CTSFQ9UBX1 484 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ENPP5Q9UJA9 477 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 NDRG2Q9UN36 371 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ANGPT4Q9Y264 503 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 ST3GAL6Q9Y274 331 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 LSM2Q9Y333 95 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 SAMHD1Q9Y3Z3 626 aaKnown RBP2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLC22A7Q9Y694 548 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 U3KQA8 63 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 PTPRBP23467 1997 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 SDK2Q58EX2 2172 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRUNE2Q8WUY3 3088 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 IGKV3D-11A0A0A0MRZ8 115 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 A0A0J9YY10 115 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 LOC100130705A0A1B0GUX0 176 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR6C74A6NCV1 312 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CLDN24A6NM45 220 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 EVPLLA8MZ36 301 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRAMEF26H0Y7S4 382 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF701M0R085 212 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 BPY2O14599 106 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 RAB29O14966 203 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 RDH16O75452 317 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 RCBTB2O95199 551 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 KRT75O95678 551 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 PTHP01270 115 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 IGKV1D-16P01601 117 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 HMGN2P05204 90 aaKnown RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CD5P06127 495 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR5H8P0DN80 308 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR12D1P0DN82 309 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 TCN2P20062 427 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 TGFBR1P36897 503 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CD79BP40259 229 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 NAA10P41227 235 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CRATP43155 626 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 MAP2K4P45985 399 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CAPZBP47756 277 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 OMPP47874 163 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 RAB38P57729 211 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CXCR4P61073 352 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 RPS15AP62244 130 aaKnown RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 HPCAP84074 193 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLAMF1Q13291 335 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 NEDD8Q15843 81 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 SSX1Q16384 188 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 DEFB134Q4QY38 66 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 SYT6Q5T7P8 510 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 UBE2UQ5VVX9 321 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 MLIPQ5VWP3 458 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 AP1ARQ63HQ0 302 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 TTC33Q6PID6 262 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 NPSR1Q6W5P4 371 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRSS58Q8IYP2 241 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 C8orf59Q8N0T1 100 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 TTC29Q8NA56 475 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 TNRC6AQ8NDV7 1962 aaKnown RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 TTLQ8NG68 377 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR4E2Q8NGC2 313 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR10G6Q8NH81 332 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms