RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 NMSQ5H8A3 153 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 RNASE11Q8TAA1 199 aaKnown RBP12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 HIST1H2BLQ99880 126 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 ELOVL1Q9BW60 279 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 LRFN1Q9P244 771 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 LILRA1O75019 489 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 TRAPPC6AO75865 159 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 LIFP15018 202 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 IGFBP4P22692 258 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 COL8A2P25067 703 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 IL2RGP31785 369 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 CLN3Q13286 438 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 P2RY6Q15077 328 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 RAB35Q15286 201 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 EXT1Q16394 746 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 RABEPKQ7Z6M1 372 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 OR56B2PQ8NGI1 322 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 MISP3Q96FF7 219 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 SLC25A31Q9H0C2 315 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 TMEM38BQ9NVV0 291 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 LOC102723971A0A1B0GUV8 181 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 PCOLCEQ15113 449 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF385CQ66K41 422 aaPredicted RBP12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF787Q6DD87 383 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 PLK3Q9H4B4 646 aa12.48□□□□□ -0.41
SEMA3F-202ENST00000413852 BCAT2O15382 392 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 CDS2O95674 445 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 TK1P04183 234 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 TESK1Q15569 626 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ADIRFQ15847 76 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 WIPI1Q5MNZ9 446 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 AAED1Q7RTV5 226 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ZDHHC23Q8IYP9 409 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 OR1A1Q9P1Q5 309 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 PPP1R3CQ9UQK1 317 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 PTRH2Q9Y3E5 179 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 RNF115Q9Y4L5 304 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 PI4KAP42356 2102 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 NCKAP5O14513 1909 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 DCHS1Q96JQ0 3298 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 A0A1B0GW64 132 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF705GA8MUZ8 300 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 PGLYRP1O75594 196 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 HSPB1P04792 205 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 DDTP30046 118 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ID3Q02535 119 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 SRYQ05066 204 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 CYB5R2Q6BCY4 276 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 SP5Q6BEB4 398 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 WDR74Q6RFH5 385 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 RPUSD4Q96CM3 377 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ATP5SQ99766 215 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 OR2H1Q9GZK4 316 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 A0A087WZY1 265 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF732B4DXR9 585 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 HAPLN4Q86UW8 402 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 FOXB1Q99853 325 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ATG101Q9BSB4 218 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 CABLES2Q9BTV7 478 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 MTCH1Q9NZJ7 389 aa12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ERRFI1Q9UJM3 462 aaPredicted RBP12.47□□□□□ -0.41
SEMA3F-202ENST00000413852 ADAMTS20P59510 1910 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 KIAA1324LA8MWY0 1029 aaPredicted RBP12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 TP53I11O14683 189 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 GZMHP20718 246 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 FUT6P51993 359 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 TAS2R30P59541 319 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 OR4X1Q8NH49 305 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 RBKSQ9H477 322 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 UNKLQ9H9P5 680 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 Q9N2K0 584 aa12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 NOSIPQ9Y314 301 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-202ENST00000413852 SPENQ96T58 3664 aaKnown RBP12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 A0A1B0GUS0 222 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 BTBD17A6NE02 478 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 NGFP01138 241 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 UCP3P55916 312 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 COL10A1Q03692 680 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 FOXL2NBQ6ZUU3 175 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 THOC3Q96J01 351 aaKnown RBP12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 CACNG5Q9UF02 275 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 CACNA1DQ01668 2161 aa12.46□□□□□ -0.42
SEMA3F-202ENST00000413852 LOC102725191A0A1B0GVB3 256 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 OR6C6A6NF89 314 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 RPL36A-HNRNPH2H7BZ11 118 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 CCL4P13236 92 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 CARD18P57730 90 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 TLE4Q04727 773 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 TMEM42Q69YG0 159 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 OR8G2PQ6IF36 304 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 ASCL4Q6XD76 172 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 IGKV1-39P01597 117 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 IGKV1D-39P04432 117 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 UMODP07911 640 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 EGR1P18146 543 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 USF2Q15853 346 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms