RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ALG10Q5BKT4 473 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 ATPAF1Q5TC12 328 aaPredicted RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 DCAF12L2Q5VW00 463 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 EIF5AL1Q6IS14 154 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 DPY19L2P2Q6ZN68 376 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 SLC16A14Q7RTX9 510 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 DPPA2Q7Z7J5 298 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 BAP18Q8IXM2 172 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 ZCCHC24Q8N2G6 241 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 OR4C16Q8NGL9 310 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 SYNPRQ8TBG9 265 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 MRPL24Q96A35 216 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 CNN2Q99439 309 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 MRPL13Q9BYD1 178 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 MRPL37Q9BZE1 423 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 NMES1Q9C002 83 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 BPESC1Q9GZL8 116 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 TLNRD1Q9H1K6 362 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 HIPK2Q9H2X6 1198 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 TXNIPQ9H3M7 391 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 MS4A5Q9H3V2 200 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 POFUT1Q9H488 388 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 ZMAT4Q9H898 229 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 CDH20Q9HBT6 801 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 NOX4Q9NPH5 578 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 UQCC1Q9NVA1 299 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 NKIRAS2Q9NYR9 191 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 TREM2Q9NZC2 230 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 RCC2Q9P258 522 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 DNAJB11Q9UBS4 358 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 STEAP1Q9UHE8 339 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 ZNF346Q9UL40 294 aaKnown RBP4.47□□□□□ -1.69
LINC00342-201ENST00000412393 TANC2Q9HCD6 1990 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 WNK2Q9Y3S1 2297 aa4.47□□□□□ -1.69
LINC00342-201ENST00000412393 DYSFO75923 2080 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 DOCK11Q5JSL3 2073 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TRAV27A0A087WT01 109 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 FXYD6-FXYD2A0A087WZ82 144 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 IGHV4-61A0A0C4DH41 118 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 METTL21EPA6NDL7 271 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TVP23AA6NH52 213 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 NPIPB13A6NJU9 1138 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM212A6NML5 194 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 OR4C45A6NMZ5 311 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 FAM157AC9JC47 383 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 NPIPB4C9JG80 1138 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SLC17A2O00624 439 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 MGST3O14880 152 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 LMX1BO60663 402 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 GLCEO94923 617 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 KDM4BO94953 1096 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 NDUFB2O95178 105 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 DUS4LO95620 317 aaKnown RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 IFNA2P01563 188 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 IFNA10P01566 189 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 IGHMP01871 453 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 MMP7P09237 267 aaPredicted RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SPP1P10451 314 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 NR2C1P13056 603 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 CCL2P13500 99 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TPT1P13693 172 aaKnown RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF32P17041 273 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 ADRA2CP18825 462 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 BDKRB2P30411 391 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 CDAP32320 146 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 APLNRP35414 380 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 CEACAM6P40199 344 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 PTGFRP43088 359 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 ALDH3B1P43353 468 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SELENOVP59797 346 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 CTXN1P60606 82 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 RPL27P61353 136 aaKnown RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 MRPS34P82930 218 aaKnown RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 FMODQ06828 376 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 PDZK1IP1Q13113 114 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 IL15RAQ13261 267 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 MADCAM1Q13477 382 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 COTL1Q14019 142 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 HABP2Q14520 560 aaPredicted RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SGCAQ16586 387 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TBC1D28Q2M2D7 210 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 C1orf100Q5SVJ3 147 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 C10orf128Q5T292 105 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 LINC01590Q5TEZ4 76 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 RAB12Q6IQ22 244 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 STEAP1BQ6NZ63 245 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SLC25A47Q6Q0C1 308 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SLC16A9Q7RTY1 509 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 DCXRQ7Z4W1 244 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 LRP11Q86VZ4 500 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 MEX3DQ86XN8 651 aaKnown RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 LYPD6Q86Y78 171 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF584Q8IVC4 421 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SLC35F2Q8IXU6 374 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 LRRC18Q8N456 261 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 NPEPL1Q8NDH3 523 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 OR1S2Q8NGQ3 325 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 OR1J2Q8NGS2 313 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 OR51A7Q8NH64 312 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms