RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZMYND19Q96E35 227 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 PCED1BQ96HM7 432 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ANAPC13Q9BS18 74 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 PNRC2Q9NPJ4 139 aaKnown RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 CMC2Q9NRP2 79 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 B4GALT7Q9UBV7 327 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ANAPC10Q9UM13 185 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 NOP16Q9Y3C1 178 aaKnown RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 TRBV5-7A0A0A0MS05 114 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 DIRC3C9JPN6 131 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 KIR2DS3K7RE56 304 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SH2D1BO14796 132 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 NPIPB7O75200 414 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 HSPB1P04792 205 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 ADH4P08319 380 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 IGFBP2P18065 325 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 CCL20P78556 96 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 MRPS34P82930 218 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 ZXDAP98168 799 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 ICAM4Q14773 271 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 KIR2DS3Q14952 304 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 DCST2Q5T1A1 773 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 ZNF787Q6DD87 383 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 C8orf86Q6ZUL3 223 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 BCORP1Q8N888 145 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 OR51G1Q8NGK1 321 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 OR5D13Q8NGL4 314 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 KIR2DL5BQ8NHK3 375 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 RNF166Q96A37 237 aaPredicted RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 OR5B12Q96R08 314 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 EBPLQ9BY08 206 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 WDR61Q9GZS3 305 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 VSIG4Q9Y279 399 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 PTRH2Q9Y3E5 179 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 HS3ST4Q9Y661 456 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 MANSC4A6NHS7 340 aaPredicted RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 FOXI3A8MTJ6 420 aaPredicted RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 HRASP01112 189 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 KRASP01116 189 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 COL9A1P20849 921 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 APOBEC1P41238 236 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 FOXG1P55316 489 aaPredicted RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 ACSM2AQ08AH3 577 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 ZIC1Q15915 447 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 ZNF77Q15935 545 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 ZNF684Q5T5D7 378 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 FKBP1CQ5VVH2 108 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SPRYD7Q5W111 196 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 ACSM2BQ68CK6 577 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 LRRC75AQ8NAA5 344 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 PP6455Q8WZ26 134 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 FGGYQ96C11 551 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 GRAMD2BQ96HH9 432 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 BTF3L4Q96K17 158 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SRSF8Q9BRL6 282 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 TMEM204Q9BSN7 226 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 PATZ1Q9HBE1 687 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 A0A1W2PQM1 296 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 MEGF11A6BM72 1044 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 EEF1E1-BLOC1S5C9J1V9 151 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 HMGN4O00479 90 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 CLDN5O00501 218 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 HLA-AP01891 365 aaKnown RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 NGFRP08138 427 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SLC25A6P12236 298 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 TAS2R50P59544 299 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 ELOCQ15369 112 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 OR8B8Q15620 311 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SIGLEC15Q6ZMC9 328 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 POC1AQ8NBT0 407 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 OR5P2Q8WZ92 322 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 DDIT4LQ96D03 193 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SPIN2AQ99865 258 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SPIN2BQ9BPZ2 258 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 TM2D2Q9BX73 214 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 FNDC4Q9H6D8 234 aaPredicted RBP4.5□□□□□ -1.69
HERC4-205ENST00000412272 MOB1AQ9H8S9 216 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 RAB9BQ9NP90 201 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 SELENOKQ9Y6D0 94 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 WSB1Q9Y6I7 421 aa4.5□□□□□ -1.69
HERC4-205ENST00000412272 GRXCR1A8MXD5 290 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 C15orf65H3BRN8 121 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 TNFSF14O43557 240 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 C1QL1O75973 258 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 CD3DP04234 171 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 ACVRL1P37023 503 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 GUCA1AP43080 201 aaPredicted RBP4.49□□□□□ -1.69
HERC4-205ENST00000412272 GPM6AP51674 278 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 PFN3P60673 137 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 LTBQ06643 244 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 PRICKLE4Q2TBC4 344 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 FA2HQ7L5A8 372 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 OR2L13Q8N349 312 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 TMEM116Q8NCL8 245 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 PELI1Q96FA3 418 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 WFDC6Q9BQY6 131 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 MANBALQ9NQG1 85 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms