RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZNF396Q96N95 335 aaPredicted RBP0.98□□□□□ -2.25
PMS1-203ENST00000409593 SUCNR1Q9BXA5 334 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 VAPAQ9P0L0 249 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 RGS12O14924 1447 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 MALRD1Q5VYJ5 2156 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 FN1P02751 2386 aaKnown RBP0.98□□□□□ -2.25
PMS1-203ENST00000409593 A0A1W2PPV4 95 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 PDCD6O75340 191 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 RHOAP61586 193 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 HBG1P69891 147 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 HBG2P69892 147 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 ZNF117Q03924 483 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 SDIM1Q6ZPB5 146 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 CCDC121Q6ZUS5 278 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 CD200R1Q8TD46 325 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 PITX2Q99697 317 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 MAP1LC3CQ9BXW4 147 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 ARHGAP32A7KAX9 2087 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 H0YIV9 168 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 NQO1P15559 274 aaKnown RBP0.97□□□□□ -2.25
PMS1-203ENST00000409593 CD36P16671 472 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 GABRA3P34903 492 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 LPAR6P43657 344 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 CLEC20AQ6ZU45 233 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 OR6N2Q8NGY6 317 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 CDKL2Q92772 493 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 GPR22Q99680 433 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 VCX3AQ9NNX9 186 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 TXNL4BQ9NX01 149 aaKnown RBP0.97□□□□□ -2.25
PMS1-203ENST00000409593 PSME2Q9UL46 239 aa0.97□□□□□ -2.25
PMS1-203ENST00000409593 TBL2Q9Y4P3 447 aaKnown RBP0.97□□□□□ -2.25
PMS1-203ENST00000409593 COL18A1P39060 1754 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 USP42Q9H9J4 1324 aaKnown RBP0.96□□□□□ -2.26
PMS1-203ENST00000409593 I3L4J1 428 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 GTF2H1P32780 548 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 HSPA13P48723 471 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 DSTNP60981 165 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 RAB2AP61019 212 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 FAM19A3Q7Z5A8 133 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 FAM184AQ8NB25 1140 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 ZNRF2Q8NHG8 242 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 GTF2H4Q92759 462 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 ZMYND19Q96E35 227 aaPredicted RBP0.96□□□□□ -2.26
PMS1-203ENST00000409593 GLT1D1Q96MS3 346 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 COPS4Q9BT78 406 aa0.96□□□□□ -2.26
PMS1-203ENST00000409593 TRGV2A0A075B6R0 118 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 IGKV1-12A0A0C4DH73 117 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 RNASEK-C17orf49H0YIS7 233 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 K7EQS6 105 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 RFXANKO14593 260 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 DENRO43583 198 aaKnown RBP0.95□□□□□ -2.26
PMS1-203ENST00000409593 SOD1P00441 154 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 IGKV1D-12P01611 117 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 ALOX5APP20292 161 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 DEKP35659 375 aaKnown RBP0.95□□□□□ -2.26
PMS1-203ENST00000409593 DGAT2L6Q6ZPD8 337 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 FAM19A1Q7Z5A9 133 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 ZFAND2AQ8N6M9 145 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 OR6K2Q8NGY2 324 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 HSPB9Q9BQS6 159 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 TAPBPLQ9BX59 468 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 FBXL15Q9H469 300 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 RTEL1-TNFRSF6BF6WH68 1400 aa0.95□□□□□ -2.26
PMS1-203ENST00000409593 IGLV3-9A0A075B6K5 115 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 TMEM250H0YL14 139 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 NAPSAO96009 420 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 LTAP01374 205 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 GIMD1P0DJR0 217 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 SPNP16150 400 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 DEFA6Q01524 100 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 PRDX1Q06830 199 aaKnown RBP0.94□□□□□ -2.26
PMS1-203ENST00000409593 ACTL10Q5JWF8 245 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 OR4X2Q8NGF9 303 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 TOP1MTQ969P6 601 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 TMBIM1Q969X1 311 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 MBOAT7Q96N66 472 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 CRLF2Q9HC73 371 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 FGF16O43320 207 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 RANBP1P43487 201 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 MP68P56378 58 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 BAXQ07812 192 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 Q6ZRN7 208 aaPredicted RBP0.94□□□□□ -2.26
PMS1-203ENST00000409593 SPICQ8N5J4 248 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 OR4K17Q8NGC6 315 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 NAA38Q9BRA0 125 aaKnown RBP0.94□□□□□ -2.26
PMS1-203ENST00000409593 Q9BRP9 147 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 SPZ1Q9BXG8 430 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 GAL3ST2Q9H3Q3 398 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 RPRD1BQ9NQG5 326 aaKnown RBP0.94□□□□□ -2.26
PMS1-203ENST00000409593 NDUFB11Q9NX14 153 aa0.94□□□□□ -2.26
PMS1-203ENST00000409593 NYNRINQ9P2P1 1898 aaKnown RBP0.93□□□□□ -2.26
PMS1-203ENST00000409593 FAM183AA6NL82 134 aa0.93□□□□□ -2.26
PMS1-203ENST00000409593 KDELR3O43731 214 aa0.93□□□□□ -2.26
PMS1-203ENST00000409593 INPP1P49441 399 aa0.93□□□□□ -2.26
PMS1-203ENST00000409593 HINT1P49773 126 aaPredicted RBP0.93□□□□□ -2.26
PMS1-203ENST00000409593 STK38Q15208 465 aa0.93□□□□□ -2.26
PMS1-203ENST00000409593 HBMQ6B0K9 141 aa0.93□□□□□ -2.26
PMS1-203ENST00000409593 LGALS9CQ6DKI2 356 aa0.93□□□□□ -2.26
PMS1-203ENST00000409593 C16orf78Q8WTQ4 265 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms