RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 BPIFB6Q8NFQ5 453 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 PGLYRP3Q96LB9 341 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 CLEC2DQ9UHP7 191 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 VWFP04275 2813 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 LY6LH3BQJ8 138 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 HSD17B6O14756 317 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 FGF16O43320 207 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 LALBAP00709 142 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 GAPDHP04406 335 aaKnown RBP7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 PF4V1P10720 104 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 SSTR5P35346 364 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 GDNFP39905 211 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 GNG10P50151 68 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 RPS11P62280 158 aaKnown RBP eCLIP7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 GPR50Q13585 617 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 LTC4SQ16873 150 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 NSUN5P1Q3KNT7 163 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 ABCA11PQ4W5N1 156 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 GLIPR1L1Q6UWM5 242 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 ZNF497Q6ZNH5 498 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 NANOGP1Q8N7R0 232 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 ZFP41Q8N8Y5 198 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 OR5AU1Q8NGC0 362 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 OR13C5Q8NGS8 318 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 PLPPR1Q8TBJ4 325 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 FBLIM1Q8WUP2 373 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 PHYHIPQ92561 330 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 TFAP2CQ92754 450 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 ARL11Q969Q4 196 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 MUL1Q969V5 352 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 R3HDM4Q96D70 268 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 DERL3Q96Q80 235 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 KCNIP1Q9NZI2 227 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 RCC2Q9P258 522 aaKnown RBP7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 TRAPPC2LQ9UL33 140 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 PSG11Q9UQ72 335 aa7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 SIRT4Q9Y6E7 314 aaPredicted RBP7.27□□□□□ -1.25
SNORD88A-201ENST00000408314 TRAV8-7A0A075B6U6 113 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 PNMA8CA0A1B0GUJ8 204 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 CCRL2O00421 344 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 SDCBPO00560 298 aaPredicted RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 KCNAB3O43448 404 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 CRTAPO75718 401 aaPredicted RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 MAS1P04201 325 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 CDK1P06493 297 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 SNRNP70P08621 437 aaKnown RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 GNAO1P09471 354 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 CD28P10747 220 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 MGMTP16455 207 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 TMEM11P17152 192 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 FUT3P21217 361 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 PSMA1P25786 263 aaKnown RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 BLCAPP62952 87 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 SLC35B1P78383 322 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 GABPB1Q06547 395 aaPredicted RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 ZNF816Q0VGE8 651 aaPredicted RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 TRAM1Q15629 374 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 C9orf152Q5JTZ5 239 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 GLT8D1Q68CQ7 371 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 RAB12Q6IQ22 244 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 BAIAP2L2Q6UXY1 529 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 LINC00311Q8N616 119 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 COMMD1Q8N668 190 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 OR56B4Q8NH76 319 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 RFESDQ8TAC1 157 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 WIPF2Q8TF74 440 aaPredicted RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 OR5M11Q96RB7 305 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 OCSTAMPQ9BR26 566 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 GON7Q9BXV9 100 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 GPR61Q9BZJ8 451 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 SELENOIQ9C0D9 397 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 GFOD1Q9NXC2 390 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 ETAA1Q9NY74 926 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 GNG12Q9UBI6 72 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 TPRKBQ9Y3C4 175 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 LRRC42Q9Y546 428 aa7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 TSSC4Q9Y5U2 329 aaPredicted RBP7.26□□□□□ -1.25
SNORD88A-201ENST00000408314 A0A1W2PPI3 338 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 TCRBV4S1A1TA0A5B7 111 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 FAM90A9PA6NNJ1 464 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 H0YHG0 523 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 RGS11O94810 467 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 DUS4LO95620 317 aaKnown RBP7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 PF4P02776 101 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 MT-ND4P03905 459 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 JUNBP17275 347 aaPredicted RBP7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 CD24P25063 80 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 SLC6A1P30531 599 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 HSPA13P48723 471 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 SPHARQ15513 63 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 KHDC1LQ5JSQ8 128 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 RBM48Q5RL73 367 aaKnown RBP7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 C6orf141Q5SZD1 244 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 STEAP3Q658P3 488 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 FOXRED2Q8IWF2 684 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 IZUMO1Q8IYV9 350 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 DRAM1Q8N682 238 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 OR51D1Q8NGF3 324 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 OR8H1Q8NGG4 311 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms