RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ANGPTL7O43827 346 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 UGT2B11O75310 529 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 S1PR2O95136 353 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC25A14O95258 325 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 TRBV12-3P01733 135 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 CST2P09228 141 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 GABRA1P14867 456 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 SPI1P17947 270 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 CDC42P60953 191 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 CRADDP78560 199 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 RBMY1FQ15415 496 aaKnown RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 SURF2Q15527 256 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR8G1Q15617 311 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 RBM48Q5RL73 367 aaKnown RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 KDM4DQ6B0I6 523 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 OLIG3Q7RTU3 272 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 SNX29P2Q8IUI4 249 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 RNF175Q8N4F7 328 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR9Q1Q8NGQ5 310 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR4K15Q8NH41 348 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 GRPEL2Q8TAA5 225 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 ASB17Q8WXJ9 295 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 RERGQ96A58 199 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF382Q96SR6 550 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 PHB2Q99623 299 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 TMEM243Q9BU79 118 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 ABCG5Q9H222 651 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 IFI27L2Q9H2X8 130 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF331Q9NQX6 463 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 FGFR1OP2Q9NVK5 253 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 RBFOX1Q9NWB1 397 aaKnown RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 HHLA2Q9UM44 414 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 UFC1Q9Y3C8 167 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 KIF1BO60333 1816 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 WNK3Q9BYP7 1800 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 A2MP01023 1474 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 A0A096LNJ9 63 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 PRORSD1PA6NEY8 169 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR6C6A6NF89 314 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 EVPLLA8MZ36 301 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 LEUTXA8MZ59 168 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 KRBOX1C9JBD0 128 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF878C9JN71 531 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 FTCDNL1E5RQL4 147 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 BHLHE40O14503 412 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 SOCS1O15524 211 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 CYB5BO43169 146 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 TCF21O43680 179 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 ENSAO43768 121 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 PLIN3O60664 434 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 HPGDSO60760 199 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 REM1O75628 298 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 SULT1C4O75897 302 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 YIF1AO95070 293 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM107AO95990 144 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC35G6P0C7Q6 338 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 HIST1H1EP10412 219 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 UGT2B7P16662 529 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 IL1RNP18510 177 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 PSMA1P25786 263 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 GRPRP30550 384 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 IFNGR2P38484 337 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 MAPK14Q16539 360 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 LIN52Q52LA3 116 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 PDZD11Q5EBL8 140 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 SAMD13Q5VXD3 122 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 TMEM236Q5W0B7 351 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 LPCAT4Q643R3 524 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 NTM-AS1Q6ZSK4 140 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 TCF24Q7RTU0 167 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC34A3Q8N130 599 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR6N1Q8NGY5 312 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR1P1Q8NH06 330 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 SFT2D1Q8WV19 159 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 RORBQ92753 470 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 ADTRPQ96IZ2 230 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 CAMK2N2Q96S95 79 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 GPR22Q99680 433 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 HSD17B10Q99714 261 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 C1orf50Q9BV19 199 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 MRPS26Q9BYN8 205 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 BOLA2Q9H3K6 86 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 MFSD1Q9H3U5 465 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 PRORYQ9H606 182 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 ACOT13Q9NPJ3 140 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 LHX9Q9NQ69 397 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 GLTPQ9NZD2 209 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 SIGLEC7Q9Y286 467 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 GPATCH8Q9UKJ3 1502 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF608Q9ULD9 1512 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF609O15014 1411 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 FGD6Q6ZV73 1430 aa3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 RRBP1Q9P2E9 1410 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 USP42Q9H9J4 1324 aaKnown RBP3.18□□□□□ -1.9
HMGB1P13-201ENST00000406019 ANKRD36BQ8N2N9 1353 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 TRAV8-4A0A0B4J246 113 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGHV1OR15-9A0A0B4J2B8 117 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 CENPVL3A0A0U1RRI6 287 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 A0A1B0GTI1 187 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms